BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_D02
(728 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450 CY... 26 1.4
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 24 4.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 7.3
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 7.3
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 23 9.7
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 9.7
>AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450
CYP4C27 protein.
Length = 150
Score = 25.8 bits (54), Expect = 1.4
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 27 FFNKTLSSSKSVCGTLI--QTRVVIHLYHCPNHRFEPF 134
FF +TLS + G + QT V IH YH HR E F
Sbjct: 77 FFGRTLSEDVQLGGHQVPAQTIVGIHAYHV--HRDERF 112
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 24.2 bits (50), Expect = 4.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 70 VPQTDFELDNVLLKNNLTEC 11
+ DF+ NVLLK +LT C
Sbjct: 247 IAHRDFKSKNVLLKADLTAC 266
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 7.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 508 WNWRKSQTTWS 476
W+W K +T WS
Sbjct: 2856 WDWSKPETVWS 2866
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 138 LPYHLLKMHQSLLLRDYPGCQCLLR 212
+P+ LLK + + D P +CLLR
Sbjct: 176 IPHKLLKSYSAGSFPDAPETRCLLR 200
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 87 VVIHLYHCPNHRFEPFLLPYHLLKMHQSLLLRDYPGCQCLLR 212
V+ H Y CP H + L H +L + P C+ + R
Sbjct: 195 VLAHSYACPEHELCVGRIAQELGFQHVTLSHQAMPMCRLVAR 236
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 87 VVIHLYHCPNHRFEPFLLPYHLLKMHQSLLLRDYPGCQCLLR 212
V+ H Y CP H + L H +L + P C+ + R
Sbjct: 195 VLAHSYACPEHELCVGRIAQELGFQHVTLSHQAMPMCRLVAR 236
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,833
Number of Sequences: 2352
Number of extensions: 12927
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -