Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_D01
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   3.7  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   3.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   6.5  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   8.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   8.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   8.6  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 501 RPATVGAANYCTTEPVVKGGAAVHSCCKTXT 409
           RP+T G++N    +P+ K     H   K+ T
Sbjct: 50  RPSTFGSSNEALPQPISKRKDKEHKKKKSKT 80


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 501 RPATVGAANYCTTEPVVKGGAAVHSCCKTXT 409
           RP+T G++N    +P+ K     H   K+ T
Sbjct: 50  RPSTFGSSNEALPQPISKRKDKEHKKKKSKT 80


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 484 PDCCGSW 504
           P+CCG W
Sbjct: 364 PNCCGKW 370


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 269 CQCDDAFY 292
           C CDD FY
Sbjct: 89  CDCDDKFY 96


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 269 CQCDDAFY 292
           C CDD FY
Sbjct: 94  CDCDDKFY 101


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -3

Query: 125 KYIFCKFDSNL 93
           +Y+FC++D N+
Sbjct: 49  RYLFCEYDPNV 59


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +2

Query: 269 CQCDDAFY 292
           C CDD FY
Sbjct: 94  CDCDDKFY 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,358
Number of Sequences: 438
Number of extensions: 2430
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)