Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C24
         (582 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.     33   0.97 
AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens ...    33   0.97 
AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast can...    33   0.97 
AF462446-1|AAP97714.1|  182|Homo sapiens unknown protein.              30   6.8  

>BC031604-1|AAH31604.1|  584|Homo sapiens C17orf71 protein protein.
          Length = 584

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 547 SAGRSIRAHGARAQGPHSQGAQKDRQFLSHVYSQXIFVRHITLFSQISNQKV 392
           +AG S+R  GA A+G  ++   +D   L   YSQ   V ++ L S   N ++
Sbjct: 107 AAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQL 158


>AK026858-1|BAB15576.1|  991|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23205 fis, clone ADSE00359. ).
          Length = 991

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 547 SAGRSIRAHGARAQGPHSQGAQKDRQFLSHVYSQXIFVRHITLFSQISNQKV 392
           +AG S+R  GA A+G  ++   +D   L   YSQ   V ++ L S   N ++
Sbjct: 111 AAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQL 162


>AF349467-1|AAL83913.1| 1023|Homo sapiens amplified in breast cancer
           2 protein.
          Length = 1023

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 547 SAGRSIRAHGARAQGPHSQGAQKDRQFLSHVYSQXIFVRHITLFSQISNQKV 392
           +AG S+R  GA A+G  ++   +D   L   YSQ   V ++ L S   N ++
Sbjct: 111 AAGGSVRGSGAVAEGNRTEAGSQDYSLLQAYYSQESKVLYLLLTSICDNSQL 162


>AF462446-1|AAP97714.1|  182|Homo sapiens unknown protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +2

Query: 476 VFLGPLRMGALGTGPVCPYGSAGRIHL 556
           V LGP R G LG GP CP G   R+HL
Sbjct: 63  VNLGPRRRGLLGCGP-CPSGKP-RVHL 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,393,518
Number of Sequences: 237096
Number of extensions: 1291479
Number of successful extensions: 2062
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2062
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)