Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C24
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    26   0.31 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   5.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.1  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   6.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.9  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 16/77 (20%), Positives = 32/77 (41%)
 Frame = -2

Query: 476 PTISLTRLFSXHFCQAHYTFFTNQ*SEGIYKAYTMSIIEDFAQQXXXXXXXXXXXXXNQQ 297
           P+I   +LF+    + +Y FFT + S  ++  +   +  D  +              +++
Sbjct: 459 PSIHFAQLFADRGMKVYYYFFTQRTSTNLWGEWMGVLHGDEVEYVFGHPLNKSLKYSDKE 518

Query: 296 HSNIINDILYHTVFDYL 246
               +  ILY + F YL
Sbjct: 519 RDLSLRMILYFSEFAYL 535


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 185 WKVKKANYNNIFXLSMR 235
           W+V  +NY  +  + MR
Sbjct: 16  WRVNNSNYTELLPIDMR 32


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 378 ICLVNTF*LLICEKSVMCL 434
           +C +NTF LL    +V C+
Sbjct: 563 VCYLNTFLLLATPTTVTCI 581


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 476 PTISLTRLFSXHFCQAHYTFFTNQ 405
           P+I   +LF+    + +Y FFT +
Sbjct: 459 PSIHFAQLFADRGMKVYYYFFTQR 482


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 378 ICLVNTF*LLICEKSVMCL 434
           +C +NTF LL    +V C+
Sbjct: 653 VCYLNTFLLLATPTTVTCI 671


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 247 YNKWSHTQXKNVIIIRFFYFPKGPQ 173
           Y K+SHT  K +++ R     K P+
Sbjct: 67  YIKYSHTHEKKLVLERSKTKSKSPE 91


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 378 YYVYNRRFCSTXI 340
           Y+V+  RFC T I
Sbjct: 90  YWVFGPRFCDTWI 102


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 523 VPLWIGRPNSFKXPIV 570
           V  W+G  NSF  P++
Sbjct: 661 VTSWLGYMNSFVNPVI 676


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 507 RAPILRGPRKTDNFSHTFIL 448
           R+P  RG     N S TFIL
Sbjct: 80  RSPESRGRSNASNTSKTFIL 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,522
Number of Sequences: 438
Number of extensions: 3177
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)