Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C23
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.022
Z81518-2|CAE11300.1| 340|Caenorhabditis elegans Hypothetical pr... 35 0.068
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 32 0.28
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 32 0.28
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 32 0.28
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 32 0.36
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 32 0.36
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.82
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.82
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 0.82
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 31 0.84
AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical ... 31 1.1
Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 30 1.9
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 30 1.9
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 30 1.9
AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical ... 30 1.9
Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical p... 29 2.6
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 2.6
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 2.6
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF077540-6|AAC26309.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.4
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 24 4.0
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 24 4.1
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 4.5
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 4.5
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 29 4.5
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.5
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 28 5.9
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z82086-1|CAB04993.1| 738|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z30215-3|CAA82935.1| 325|Caenorhabditis elegans Hypothetical pr... 28 7.8
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 28 7.8
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 28 7.8
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 93.9 bits (223), Expect = 1e-19
Identities = 59/177 (33%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Frame = -1
Query: 661 CSRRSYCGLQALASRTLQERRSMYDXXXXXXXXXXXXXXXXXVLCINYLAGFCPDGASCK 482
CS R C + + T + YD +C NYLAGFC G C+
Sbjct: 119 CSNRE-CPFRHIDPETKMKDCPWYDRGFCRHGPYCKHRHRRRAVCPNYLAGFCLQGPDCQ 177
Query: 481 FMHPRFELP-----APPDQPKDAKRLPVCHSCSEVGHKASSCPKIPPDQREAAQKQEEAR 317
+ HP F LP A + CH+C E GHKA++CP +P R Q Q+
Sbjct: 178 YAHPSFGLPSFENIAVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTR---QNQDHHH 234
Query: 316 YRSLGYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGAKGHYANKCPKGHLAFLSS 146
L + K + +VTC+KCG KGHYAN+C KG LAFLS+
Sbjct: 235 RVDLSLIPD----------------KKNLSDVTCYKCGEKGHYANRCHKGALAFLSN 275
Score = 65.3 bits (152), Expect = 4e-11
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = -2
Query: 693 CGNGAQCPYRHVRGDRTVVCKHWLRGLCKKGDQC 592
C G CP RH+ G++ VVCKHWLRGLCKKGDQC
Sbjct: 63 CPFGPTCPLRHIDGEKAVVCKHWLRGLCKKGDQC 96
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 720 CEFYXQPGGCGNGAQCPYRHVRGDRTVVCKHWLRGLCKKGDQC 592
C +Y + G C +G C +RH R VC ++L G C +G C
Sbjct: 138 CPWYDR-GFCRHGPYCKHRH---RRRAVCPNYLAGFCLQGPDC 176
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 229 EEVTCFKCGAKGHYANKCPKGHLAFLSSQNQ 137
+ +TC C +GH A CP HL + QNQ
Sbjct: 202 QAITCHNCHERGHKATTCP--HLPGQTRQNQ 230
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 532 LCINYLAGFCPDGASCKFMHPRFELPAPPD 443
+C ++L G C G C+F+H ++L P+
Sbjct: 81 VCKHWLRGLCKKGDQCEFLH-EYDLTKMPE 109
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 723 VCEFYXQPGGCGNGAQCPYRHVRGD---RTVVCKHWLRGLCKKGDQCM 589
+C+F+ + G C +G C Y H D R V+C + CKKG QC+
Sbjct: 170 ICKFFRE-GYCRDGDNCLYSHQAEDSLRRPVLCNFYANSFCKKGLQCL 216
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 475 HPRFELPA--PPDQPKDAK----RLPVCHSCSEVGHKASSCPKIPPDQREAAQKQEEARY 314
HP+FE+ D+ KD++ R P C+ C VGH + CP+ + +K E +
Sbjct: 286 HPKFEVNQVDADDKKKDSRKGNYRPPYCYKCKVVGHVSKDCPQSSTNSGVTNRKTEHSEV 345
Query: 313 RSL 305
+L
Sbjct: 346 NTL 348
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 217 CFKCGAKGHYANKCPKGHLAFLSSQNQGGTNFRKQN 110
C+KC GH + CP+ SS N G TN + ++
Sbjct: 313 CYKCKVVGHVSKDCPQ------SSTNSGVTNRKTEH 342
>Z81518-2|CAE11300.1| 340|Caenorhabditis elegans Hypothetical
protein F28D9.2a protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 432 TQNAFLFVTAVRKLDTKLRHVQKYHLIKEKQPRSKKKLDTVPWAMLNPQSSKKTTVV 262
T + F FVTA+ L ++L HVQ+ ++++ P LD + M +P + TT V
Sbjct: 142 TCHTFPFVTAICLLKSELSHVQQVRILEKNWPNCLHILDHRGFVMYDPFDNPWTTAV 198
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPKI-PPDQREAAQKQEEARYRSLGYVKPAIEQEDNS 266
+PK + VC++C + GH + CP+ P + G+ E N+
Sbjct: 388 EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNN 447
Query: 265 ---GPRL--------QKIVHKPIEEVTCFKCGAKGHYANKCP 173
GP + P CF CG +GH +N+CP
Sbjct: 448 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECP 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPK 365
+PK + VC++C + GH + CP+
Sbjct: 274 EPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE A+
Sbjct: 475 CFNCGEQGHRSNECPN-PAKPREGAE 499
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 259 CFNCQQPGHRSNDCPE-PKKERE 280
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 373 CFNCQQPGHRSNDCPE-PKKERE 394
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 277 KEREPRVCYNCQQPGHNSRDCPE 299
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 391 KEREPRVCYNCQQPGHNSRDCPE 413
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPKI-PPDQREAAQKQEEARYRSLGYVKPAIEQEDNS 266
+PK + VC++C + GH + CP+ P + G+ E N+
Sbjct: 388 EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNN 447
Query: 265 ---GPRL--------QKIVHKPIEEVTCFKCGAKGHYANKCP 173
GP + P CF CG +GH +N+CP
Sbjct: 448 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECP 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPK 365
+PK + VC++C + GH + CP+
Sbjct: 274 EPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE A+
Sbjct: 475 CFNCGEQGHRSNECPN-PAKPREGAE 499
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 259 CFNCQQPGHRSNDCPE-PKKERE 280
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 373 CFNCQQPGHRSNDCPE-PKKERE 394
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 277 KEREPRVCYNCQQPGHNSRDCPE 299
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 391 KEREPRVCYNCQQPGHNSRDCPE 413
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPKI-PPDQREAAQKQEEARYRSLGYVKPAIEQEDNS 266
+PK + VC++C + GH + CP+ P + G+ E N+
Sbjct: 388 EPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNN 447
Query: 265 ---GPRL--------QKIVHKPIEEVTCFKCGAKGHYANKCP 173
GP + P CF CG +GH +N+CP
Sbjct: 448 EERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECP 489
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 442 QPKDAKRLPVCHSCSEVGHKASSCPK 365
+PK + VC++C + GH + CP+
Sbjct: 274 EPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE A+
Sbjct: 475 CFNCGEQGHRSNECPN-PAKPREGAE 499
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 259 CFNCQQPGHRSNDCPE-PKKERE 280
Score = 27.9 bits (59), Expect(2) = 0.28
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH+++ CP+ P +RE
Sbjct: 373 CFNCQQPGHRSNDCPE-PKKERE 394
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 277 KEREPRVCYNCQQPGHNSRDCPE 299
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKCPK 170
K E C+ C GH + CP+
Sbjct: 391 KEREPRVCYNCQQPGHNSRDCPE 413
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQKQEEARYRSLGYVKPAIEQED--NSGPRLQKIVH 239
CH+C E GH + C K P R + E+ + + +P + + N G V
Sbjct: 572 CHNCGEEGHISKECDK-PKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVD 630
Query: 238 --KP-IEEVTCFKCGAKGHYANKC 176
+P + C CG +GH+A C
Sbjct: 631 CDQPKVPRGPCRNCGQEGHFAKDC 654
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 445 DQPKDAKRLPVCHSCSEVGHKASSC--PKIP 359
D+PK R P C +C ++GH AS C P++P
Sbjct: 586 DKPK-VPRFP-CRNCEQLGHFASDCDQPRVP 614
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQKQEEARYRSLGYVKPAIEQED--NSGPRLQKIVH 239
CH+C E GH + C K P R + E+ + + +P + + N G V
Sbjct: 572 CHNCGEEGHISKECDK-PKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVD 630
Query: 238 --KP-IEEVTCFKCGAKGHYANKC 176
+P + C CG +GH+A C
Sbjct: 631 CDQPKVPRGPCRNCGQEGHFAKDC 654
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 445 DQPKDAKRLPVCHSCSEVGHKASSC--PKIP 359
D+PK R P C +C ++GH AS C P++P
Sbjct: 586 DKPK-VPRFP-CRNCEQLGHFASDCDQPRVP 614
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 217 CFKCGAKGHYANKCP 173
CF CG +GH +N+CP
Sbjct: 264 CFNCGEQGHRSNECP 278
Score = 28.7 bits (61), Expect(2) = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH++S CP+ P +RE
Sbjct: 160 CFNCQQPGHRSSDCPE-PRKERE 181
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE +
Sbjct: 264 CFNCGEQGHRSNECPN-PAKPREGVE 288
Score = 21.0 bits (42), Expect(2) = 0.82
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKC 176
K E C+ C GH + +C
Sbjct: 178 KEREPRVCYNCQQPGHTSREC 198
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 217 CFKCGAKGHYANKCP 173
CF CG +GH +N+CP
Sbjct: 264 CFNCGEQGHRSNECP 278
Score = 28.7 bits (61), Expect(2) = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH++S CP+ P +RE
Sbjct: 160 CFNCQQPGHRSSDCPE-PRKERE 181
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE +
Sbjct: 264 CFNCGEQGHRSNECPN-PAKPREGVE 288
Score = 21.0 bits (42), Expect(2) = 0.82
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKC 176
K E C+ C GH + +C
Sbjct: 178 KEREPRVCYNCQQPGHTSREC 198
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 217 CFKCGAKGHYANKCP 173
CF CG +GH +N+CP
Sbjct: 264 CFNCGEQGHRSNECP 278
Score = 28.7 bits (61), Expect(2) = 0.82
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQRE 344
C +C + GH++S CP+ P +RE
Sbjct: 160 CFNCQQPGHRSSDCPE-PRKERE 181
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQ 335
C +C E GH+++ CP P RE +
Sbjct: 264 CFNCGEQGHRSNECPN-PAKPREGVE 288
Score = 21.0 bits (42), Expect(2) = 0.82
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1
Query: 238 KPIEEVTCFKCGAKGHYANKC 176
K E C+ C GH + +C
Sbjct: 178 KEREPRVCYNCQQPGHTSREC 198
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 31.1 bits (67), Expect = 0.84
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 220 TCFKCGAKGHYANKCP 173
+C+ CG +GHY+ CP
Sbjct: 68 SCYNCGGRGHYSRDCP 83
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 1/81 (1%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPKIPPDQREAAQKQEEARYRSLGYVKPAIEQEDNSGPRLQKIVHK- 236
C++C GH + CP + RS G K SG ++
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQK--CYNCGRSGHISRECTESG 126
Query: 235 PIEEVTCFKCGAKGHYANKCP 173
EE C++C GH + CP
Sbjct: 127 SAEEKRCYQCQETGHISRDCP 147
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 220 TCFKCGAKGHYANKCPKG 167
TC+ C GH++ CPKG
Sbjct: 36 TCYNCQETGHFSRDCPKG 53
>AF043701-3|ABP57819.1| 147|Caenorhabditis elegans Hypothetical
protein K12C11.3 protein.
Length = 147
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 164 MTFGTFICIVTFCATLKTGYFFYG 235
MTF +IC+ + C L GYFF+G
Sbjct: 122 MTFNVYICL-SLCLGLTIGYFFFG 144
>Z82286-4|CAB05310.1| 468|Caenorhabditis elegans Hypothetical
protein W02A2.7 protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = -1
Query: 532 LCINYL---AGFCPDGASCKFMHP 470
LC N+ GFCP G C+F+HP
Sbjct: 319 LCKNFARGGTGFCPYGLRCEFVHP 342
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -1
Query: 532 LCINYLAGF--CPDGASCKFMHPRFEL---PAPPDQPKDAKRLPVCHSCSEVGHKASSCP 368
LC+ + +G C GA CKF H EL AP P + + +C + + G CP
Sbjct: 275 LCMMHASGIKPCDMGARCKFAHGLKELRATDAPARYPNNKYKTKLCKNFARGG--TGFCP 332
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 QKQEEARYRSLGYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGA-KGHYANKCP 173
Q++ + R V +E + G R+ + K + CF+CG H A CP
Sbjct: 73 QERSNGKGREAYAVSGEVEGQGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCP 128
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 QKQEEARYRSLGYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGA-KGHYANKCP 173
Q++ + R V +E + G R+ + K + CF+CG H A CP
Sbjct: 104 QERSNGKGREAYAVSGEVEGQGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCP 159
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 529 CINYLAGFCPDGASCKFMHP 470
C NYL G C G C+F HP
Sbjct: 139 CKNYLKGKCRFGDKCRFSHP 158
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 723 VCEFYXQPGGCGNGAQCPYRH 661
+C F+ + G C G +CPYRH
Sbjct: 167 ICSFFVK-GECKRGEECPYRH 186
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 QKQEEARYRSLGYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGA-KGHYANKCP 173
Q++ + R V +E + G R+ + K + CF+CG H A CP
Sbjct: 104 QERSNGKGREAYAVSGEVEGQGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCP 159
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 337 QKQEEARYRSLGYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGA-KGHYANKCP 173
Q++ + R V +E + G R+ + K + CF+CG H A CP
Sbjct: 104 QERSNGKGREAYAVSGEVEGQGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCP 159
>AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical
protein C29F9.6 protein.
Length = 203
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 693 CGNGAQCPYRHVRGDRTVVCKHWLR 619
C NG QCP H R V+ HW R
Sbjct: 31 CWNGFQCPSEHCTSSRMVI-HHWTR 54
>Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical
protein AH6.5 protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -1
Query: 532 LCINYLAGF--CPDGASCKFMHPRFELPA---PPDQPKDAKRLPVCHSCSEVGHKASSCP 368
LC+ + AG C GA CKF H EL A P P + + +C + + G + CP
Sbjct: 278 LCMTHAAGINPCALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGG--SGVCP 335
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = -1
Query: 457 PAPPDQPKDAKRLPVCHSCSEVGHKASSCPKIPPDQREAAQ-----KQEEARYRSLGYVK 293
PAP P A + P+ E K + P P D A+ K+EE R +++
Sbjct: 200 PAPTPAPTPAPK-PI-----EEAPKPAEEPVKPADLEMDAEIERLIKEEEERMKNVAEQP 253
Query: 292 PAIEQEDNSGPRLQKIVHKPIEEVT 218
P + Q P QK+ +P+E VT
Sbjct: 254 PLVLQSLPETPEAQKLPEEPLEPVT 278
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = -1
Query: 457 PAPPDQPKDAKRLPVCHSCSEVGHKASSCPKIPPDQREAAQ-----KQEEARYRSLGYVK 293
PAP P A + P+ E K + P P D A+ K+EE R +++
Sbjct: 200 PAPTPAPTPAPK-PI-----EEAPKPAEEPVKPADLEMDAEIERLIKEEEERMKNVAEQP 253
Query: 292 PAIEQEDNSGPRLQKIVHKPIEEVT 218
P + Q P QK+ +P+E VT
Sbjct: 254 PLVLQSLPETPEAQKLPEEPLEPVT 278
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 532 LCINYLAGFCPDGASCKFMH 473
LC+ + G C GA CKF H
Sbjct: 95 LCVFFKQGLCGKGAKCKFSH 114
>AF077540-6|AAC26309.1| 315|Caenorhabditis elegans Hypothetical
protein T07H3.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/75 (25%), Positives = 38/75 (50%)
Frame = -2
Query: 480 LCIRALNYQHHQINPKTQNAFLFVTAVRKLDTKLRHVQKYHLIKEKQPRSKKKLDTVPWA 301
+ + A+ +Q + + K + FL T++ KL+TKL QKY L E Q ++ +
Sbjct: 97 ILLLAVKFQTYTVIKKCEK-FLIHTSMAKLETKLALAQKYDL-TELQTHCNEEFQAA-FP 153
Query: 300 MLNPQSSKKTTVVQD 256
+ P+ +K + ++
Sbjct: 154 VREPEIQRKPAIYRN 168
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 304 GYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGAKGHYANKCP 173
G+ K + + +G Q++ + TC +C GHY NK P
Sbjct: 202 GHKKTSCPYCNGTGAVSQRLQGGFFYQTTCNRCRGSGHY-NKNP 244
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
Frame = -1
Query: 412 CHSCS-EVGHKASSCP 368
CH E GHK +SCP
Sbjct: 194 CHGTQVEPGHKKTSCP 209
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 304 GYVKPAIEQEDNSGPRLQKIVHKPIEEVTCFKCGAKGHYANKCP 173
G+ K + + +G Q++ + TC +C GHY NK P
Sbjct: 202 GHKKTSCPYCNGTGAVSQRLQGGFFYQTTCNRCRGSGHY-NKNP 244
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
Frame = -1
Query: 412 CHSCS-EVGHKASSCP 368
CH E GHK +SCP
Sbjct: 194 CHGTQVEPGHKKTSCP 209
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -1
Query: 532 LCINYL-AGFCPDGASCKFMHPR 467
+C +Y GFC G SCKF+H R
Sbjct: 180 ICKDYKETGFCTFGDSCKFVHDR 202
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 490 RLHLGRNRPSSLCRAHVVRACDDSVV----HGGRSLCHTLIAFLA 612
+ HL + RP + V + +D+VV GG+SLC+ L A LA
Sbjct: 81 QFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLA 125
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 490 RLHLGRNRPSSLCRAHVVRACDDSVV----HGGRSLCHTLIAFLA 612
+ HL + RP + V + +D+VV GG+SLC+ L A LA
Sbjct: 104 QFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLA 148
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -1
Query: 532 LCINYL-AGFCPDGASCKFMHPR 467
+C +Y GFC G SCKF+H R
Sbjct: 180 ICKDYKETGFCTFGDSCKFVHDR 202
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 418 PVCHSCSEVGHKASSCPK 365
P C +C E+GH ++ CPK
Sbjct: 608 PQCFTCGEMGHISTYCPK 625
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 217 CFKCGAKGHYANKCPK 170
CF CG GH + CPK
Sbjct: 610 CFTCGEMGHISTYCPK 625
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 532 LCINYLAGFCPDGASCKFMHPRFELPAPPDQPKD 431
+C ++L C G+ CKF HP APP D
Sbjct: 58 VCRDFLKNICNRGSRCKFYHPS---EAPPISDHD 88
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 217 CFKCGAKGHYANKCPKGHLAFLSSQNQGGTNFRKQN 110
C CGA H CP+ L++Q GG +F K++
Sbjct: 309 CNVCGANTHLRRDCPE-----LAAQKAGGAHFEKKH 339
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 412 CHSCSEVGHKASSCPK 365
CH C +GH SCP+
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>Z82086-1|CAB04993.1| 738|Caenorhabditis elegans Hypothetical
protein ZK228.1 protein.
Length = 738
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 418 PVCHSCSEVGHKASS 374
PVCHSC + GH A++
Sbjct: 191 PVCHSCDQRGHTAAT 205
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 514 AGFCPDGASCKFMHPRFELPAPPDQPK 434
+G CP G +C+F H EL P QP+
Sbjct: 150 SGSCPYGEACRFAHGENEL-RMPSQPR 175
>Z30215-3|CAA82935.1| 325|Caenorhabditis elegans Hypothetical
protein F40F12.3 protein.
Length = 325
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 396 KLDTKLRHVQKYHLIKEKQPRSKKKLDTVPWAMLNPQSS 280
KLD K+ HV + L + KQ + K T +LNP +S
Sbjct: 32 KLDKKVPHVFRATLKQPKQTNLRGKFTTSCMRLLNPDTS 70
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 514 AGFCPDGASCKFMHPRFELPAPPDQPK 434
+G CP G +C+F H EL P QP+
Sbjct: 150 SGSCPYGEACRFAHGENEL-RMPSQPR 175
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 420 FLFVTAVRKLDTKLRHVQKYHLIKEKQPRSKKKLDTVPWAMLNPQSSKKTTVVQ 259
F F+T VRK +K+R + +YH + K + L + S KT +V+
Sbjct: 249 FEFLTPVRKNASKIRELDEYHQLSAKVIEESMNDLKIKNETLTKELSDKTELVK 302
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 514 AGFCPDGASCKFMHPRFELPAPPDQPK 434
+G CP G +C+F H EL P QP+
Sbjct: 150 SGSCPYGEACRFAHGENEL-RMPSQPR 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,515,733
Number of Sequences: 27780
Number of extensions: 384623
Number of successful extensions: 1409
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -