Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C22
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 114 1e-25
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 114 1e-25
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 114 1e-25
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 114 1e-25
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 114 1e-25
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 114 1e-25
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 114 1e-25
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 64 2e-10
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 51 2e-06
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 29 6.1
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 29 6.1
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 29 6.1
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 114 bits (274), Expect = 1e-25
Identities = 61/115 (53%), Positives = 72/115 (62%)
Frame = -3
Query: 363 MGKVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIV 184
M K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 183 XHQKMKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQKESALP 19
+Q K LR YK KKYKPLDLR KKTRAMR+ L KHE + +++ +KE P
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYP 115
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 64.1 bits (149), Expect = 2e-10
Identities = 37/72 (51%), Positives = 42/72 (58%)
Frame = -3
Query: 357 KVKCSELRTKDXXXXXXXXXXXXXXLTNLRVAKVTGGVASKLSKIRVVRKAXARVYIVXH 178
K+K +LR K L+ LRVAKVTGG ASKLSKIRVVRK+ ARV V +
Sbjct: 2 KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61
Query: 177 QKMKVKLRNHYK 142
Q K LR YK
Sbjct: 62 QTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -3
Query: 273 LRVAKVTGGVASKLSKIRVVRKAXARVYIVXHQ 175
LRVAKVTGG ASKLSKIRVVRK+ ARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 171 MKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQ 37
M+ ++ +NK+ K L L+ ++ AM A KHE+ ++ R Q
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQ 113
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 171 MKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQ 37
M+ ++ +NK+ K L L+ ++ AM A KHE+ ++ R Q
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQ 113
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 171 MKVKLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKXQDEERDQ 37
M+ ++ +NK+ K L L+ ++ AM A KHE+ ++ R Q
Sbjct: 69 MEEAIQKAEENKRLKELQLKQEEKLAMELAKLKHESLKDEKMRQQ 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,956,686
Number of Sequences: 237096
Number of extensions: 604414
Number of successful extensions: 1430
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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