Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C19
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280...    30   2.4  
09_04_0393 + 17255315-17256019,17256107-17257909                       28   7.2  
08_02_0208 - 14318485-14319283,14319704-14320170                       28   7.2  
03_05_0796 + 27787401-27788831                                         28   9.5  

>06_03_1416 +
           30027066-30027663,30027739-30027848,30027927-30028003,
           30028080-30028173,30028314-30028437,30028537-30028591,
           30028666-30028747,30028832-30028909,30028995-30029135,
           30029416-30029645,30029724-30029867,30029934-30030047,
           30030139-30030994,30031149-30031312,30031398-30031445,
           30033435-30033500,30033845-30033922,30034324-30034366
          Length = 1033

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 439 GRSQSGSFSFHHINVSDR*PLRY-TPCNIKYICDLNLLSFGVINTIILP 582
           GRS +G +   H+ VSD   ++   PCN +  C      F  + T +LP
Sbjct: 671 GRSWNGHWDLDHVMVSDSLDVKIDLPCNYQAACKTEAHDFLRVATDVLP 719


>09_04_0393 + 17255315-17256019,17256107-17257909
          Length = 835

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 495 LPVADIYVMKAEATTLRAAGSDPNNPKVLAVNLQKAQMVSMIVA 364
           LP+A I  +K  +T+  A GS  +NP    + L +A  ++  +A
Sbjct: 766 LPIAQISNVKNTSTSFDAVGSSNSNPYKYRMLLPRADTIATTIA 809


>08_02_0208 - 14318485-14319283,14319704-14320170
          Length = 421

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 273 LHGTLVGNERVSTDQTVEMLLQESSGKSTGNKHVYVPEEVKNMFRTQNELQKDM 112
           +HGT V NER++ D  VE+ + +S  +   +   Y+  +    F   + L  D+
Sbjct: 165 VHGTFVANERLTKDNPVELEVGQSL-RFAASTRTYILRKNSAAFFPTHSLPSDV 217


>03_05_0796 + 27787401-27788831
          Length = 476

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 468 KAEATTLRAAGSDPNNPKVLAVNLQKAQMVSMIVALINARGHRSDADDGKLK 313
           KAE+ +   AG D  N KV   + ++   ++ +V    A  H  D+D GK+K
Sbjct: 354 KAESASAIDAGGDAGNNKVAHGDGEENDKIAGVVV---ASSHDGDSDVGKMK 402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,350,754
Number of Sequences: 37544
Number of extensions: 345368
Number of successful extensions: 915
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)