Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C19
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U64603-4|AAO61442.1|  410|Caenorhabditis elegans Serotonin/octop...    30   2.1  
U64603-3|AAM15552.1|  422|Caenorhabditis elegans Serotonin/octop...    30   2.1  
U64603-2|AAB04582.3|  435|Caenorhabditis elegans Serotonin/octop...    30   2.1  
AL032627-2|CAB63353.2|  521|Caenorhabditis elegans Hypothetical ...    29   4.9  
AF016685-3|AAG24145.2|  422|Caenorhabditis elegans Hypothetical ...    29   4.9  

>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -3

Query: 651 TVYISVNSVCWTLINKNDYEVVEWQYYSIDYPEGKKIQITDIFDIAWRITQRLPVADIYV 472
           T +I    VCW  I+  +   V W+YY+ D+P      IT IF++ +R T    +A+  V
Sbjct: 145 TPFIYRIGVCWEPISFENGVTVNWRYYA-DFP------ITPIFELYYRETTLPYIAESMV 197


>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
           protein C28A5.1 protein.
          Length = 1223

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -3

Query: 651 TVYISVNSVCWTLINKNDYEVVEWQYYSIDYPEGKKIQITDIFDIAWRITQRLPVADIYV 472
           T +I    VCW  I+  +   V W+YY+ D+P      IT IF++ +R T    +A+  V
Sbjct: 145 TPFIYRIGVCWEPISFENGVTVNWRYYA-DFP------ITPIFELYYRETTLPYIAESMV 197


>U64603-4|AAO61442.1|  410|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform c
           protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 487 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 651
           D+ PL  T C++    DL L +  ++N   + +  +++I     +  KR T  I  YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164


>U64603-3|AAM15552.1|  422|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform b
           protein.
          Length = 422

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 487 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 651
           D+ PL  T C++    DL L +  ++N   + +  +++I     +  KR T  I  YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164


>U64603-2|AAB04582.3|  435|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 7, isoform a
           protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 487 DR*PLRYTPCNIKYICDLNLLSFGVINTIILPLHNFIII-----FVYKRPTN*INRYIYC 651
           D+ PL  T C++    DL L +  ++N   + +  +++I     +  KR T  I  YI C
Sbjct: 105 DKWPLGSTMCSVYTTSDLTLCTASIVNLCAISVDRYLVISSPLRYSAKRTTKRIMMYIAC 164


>AL032627-2|CAB63353.2|  521|Caenorhabditis elegans Hypothetical
           protein Y41C4A.2 protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 27/106 (25%), Positives = 48/106 (45%)
 Frame = -3

Query: 615 LINKNDYEVVEWQYYSIDYPEGKKIQITDIFDIAWRITQRLPVADIYVMKAEATTLRAAG 436
           L+ K  YEVV+++   I  P     Q+  +F    R      + ++Y  K+ +  L   G
Sbjct: 301 LLEKQGYEVVKFEMEDIFPP----FQVAQMFFKTQRPVDSNFIPNLY--KSNSQCLGRFG 354

Query: 435 SDPNNPKVLAVNLQKAQMVSMIVALINARGHRSDADDGKLKQIVYF 298
              N PK++A   ++A ++S    +     +  D +  KLK I Y+
Sbjct: 355 KFLNFPKLVARISKRAAVISQSSNMKEMCKNLEDIESYKLKFIEYW 400


>AF016685-3|AAG24145.2|  422|Caenorhabditis elegans Hypothetical
           protein F59E11.11 protein.
          Length = 422

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -3

Query: 774 LCDSILNGPTEEVXQISNKXKGQILHPNLKESTIKDCKTVLTVYISVNSVCWTLINK 604
           L   +L G  EEV Q         LH + K+  +      LT  +S+N+   +L+NK
Sbjct: 338 LTGKMLGGDVEEVTQKLQDVLANDLHEHYKDQEVSRYAHRLTKLLSINNDWQSLLNK 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,615,931
Number of Sequences: 27780
Number of extensions: 336723
Number of successful extensions: 845
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)