SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C14
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D14660-1|BAA03494.1|  280|Homo sapiens KIAA00104 protein.             199   1e-50
BC030144-1|AAH30144.2|  292|Homo sapiens mitochondrial ribosomal...   199   1e-50
AC005034-2|AAY14972.1|  280|Homo sapiens unknown protein.             199   1e-50
BC093088-1|AAH93088.1|  294|Homo sapiens LRRIQ1 protein protein.       31   3.4  
BC005399-1|AAH05399.1|  240|Homo sapiens LRRIQ1 protein protein.       31   3.4  
AK022365-1|BAB14022.1|  534|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.     31   3.4  
U13220-1|AAC32226.1|  444|Homo sapiens forkhead protein FREAC-2 ...    31   6.0  
BC014194-1|AAH14194.2|  520|Homo sapiens T-box 22 protein.             31   6.0  
AY035371-1|AAK63189.1|  520|Homo sapiens T-box transcription fac...    31   6.0  
AL034346-1|CAI22285.1|  444|Homo sapiens forkhead box F2 protein.      31   6.0  
AL031000-2|CAI43070.1|  520|Homo sapiens T-box 22 protein.             31   6.0  
AL031000-1|CAI43069.1|  400|Homo sapiens T-box 22 protein.             31   6.0  
AF251684-1|AAG23749.1|  400|Homo sapiens TBXX T-box containing p...    31   6.0  
AF084939-1|AAD19875.1|  444|Homo sapiens forkhead transcription ...    31   6.0  

>D14660-1|BAA03494.1|  280|Homo sapiens KIAA00104 protein.
          Length = 280

 Score =  199 bits (485), Expect = 1e-50
 Identities = 100/209 (47%), Positives = 140/209 (66%)
 Frame = -3

Query: 678 ENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGK 499
           E R   PEF+P       + L+ ++ER DML+RR  + IPEFYVGSIL VT ADP++ GK
Sbjct: 60  ERRFLSPEFIPRRGRT--DPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGK 117

Query: 498 TNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFY 319
            ++F+GICI+R G GL A F LRNV++ QGVE+ ++LY+P + +IQV+++EKRLDD L Y
Sbjct: 118 ISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLY 177

Query: 318 LRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLT 139
           LRDALPEYSTF  +M P +      VP+N +KV++KPKPW +RWER     I  I   L 
Sbjct: 178 LRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWERPNF-NIKGIRFDLC 236

Query: 138 KKDKVRRELRKTXLGKI*FDEAIQENDSN 52
             ++  +E +K     + FD  ++E D++
Sbjct: 237 LTEQQMKEAQKWNQPWLEFD-MMREYDTS 264


>BC030144-1|AAH30144.2|  292|Homo sapiens mitochondrial ribosomal
           protein L19 protein.
          Length = 292

 Score =  199 bits (485), Expect = 1e-50
 Identities = 100/209 (47%), Positives = 140/209 (66%)
 Frame = -3

Query: 678 ENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGK 499
           E R   PEF+P       + L+ ++ER DML+RR  + IPEFYVGSIL VT ADP++ GK
Sbjct: 72  ERRFLSPEFIPRRGRT--DPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGK 129

Query: 498 TNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFY 319
            ++F+GICI+R G GL A F LRNV++ QGVE+ ++LY+P + +IQV+++EKRLDD L Y
Sbjct: 130 ISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLY 189

Query: 318 LRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLT 139
           LRDALPEYSTF  +M P +      VP+N +KV++KPKPW +RWER     I  I   L 
Sbjct: 190 LRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWERPNF-NIKGIRFDLC 248

Query: 138 KKDKVRRELRKTXLGKI*FDEAIQENDSN 52
             ++  +E +K     + FD  ++E D++
Sbjct: 249 LTEQQMKEAQKWNQPWLEFD-MMREYDTS 276


>AC005034-2|AAY14972.1|  280|Homo sapiens unknown protein.
          Length = 280

 Score =  199 bits (485), Expect = 1e-50
 Identities = 100/209 (47%), Positives = 140/209 (66%)
 Frame = -3

Query: 678 ENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGK 499
           E R   PEF+P       + L+ ++ER DML+RR  + IPEFYVGSIL VT ADP++ GK
Sbjct: 60  ERRFLSPEFIPRRGRT--DPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGK 117

Query: 498 TNRFVGICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFY 319
            ++F+GICI+R G GL A F LRNV++ QGVE+ ++LY+P + +IQV+++EKRLDD L Y
Sbjct: 118 ISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELYNPRVQEIQVVKLEKRLDDSLLY 177

Query: 318 LRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLT 139
           LRDALPEYSTF  +M P +      VP+N +KV++KPKPW +RWER     I  I   L 
Sbjct: 178 LRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWERPNF-NIKGIRFDLC 236

Query: 138 KKDKVRRELRKTXLGKI*FDEAIQENDSN 52
             ++  +E +K     + FD  ++E D++
Sbjct: 237 LTEQQMKEAQKWNQPWLEFD-MMREYDTS 264


>BC093088-1|AAH93088.1|  294|Homo sapiens LRRIQ1 protein protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 312 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKK 133
           D +PE S     MD  +LP+   +     +VE K +   E W+ ++ + + + E+   K 
Sbjct: 133 DFVPEPSPHDLPMDEHVLPDDADINFGYCEVEEKCRQSFEAWQEKQKE-LEDKEKQTLKA 191

Query: 132 DKVRRE 115
            + R E
Sbjct: 192 QRDREE 197


>BC005399-1|AAH05399.1|  240|Homo sapiens LRRIQ1 protein protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 312 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKK 133
           D +PE S     MD  +LP+   +     +VE K +   E W+ ++ + + + E+   K 
Sbjct: 131 DFVPEPSPHDLPMDEHVLPDDADINFGYCEVEEKCRQSFEAWQEKQKE-LEDKEKQTLKA 189

Query: 132 DKVRRE 115
            + R E
Sbjct: 190 QRDREE 195


>AK022365-1|BAB14022.1|  534|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12303 fis, clone MAMMA1001868, weakly similar to
           TRICHOHYALIN. ).
          Length = 534

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 312 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKK 133
           D +PE S     MD  +LP+   +     +VE K +   E W+ ++ + + + E+   K 
Sbjct: 133 DFVPEPSPHDLPMDEHVLPDDADINFGYCEVEEKCRQSFEAWQEKQKE-LEDKEKQTLKA 191

Query: 132 DKVRRE 115
            + R E
Sbjct: 192 QRDREE 197


>AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.
          Length = 1227

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -3

Query: 312 DALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKK 133
           D +PE S     MD  +LP+   +     +VE K +   E W+ ++ + + + E+   K 
Sbjct: 24  DFVPEPSPHDLPMDEHVLPDDADINFGYCEVEEKCRQSFEAWQEKQKE-LEDKEKQTLKA 82

Query: 132 DKVRRE 115
            + R E
Sbjct: 83  QRDREE 88


>U13220-1|AAC32226.1|  444|Homo sapiens forkhead protein FREAC-2
           protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 453 IHILFSQYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTF 611
           +H   S Y  +Q+Y      ED  + LPR   H T VC    +V  +    +F
Sbjct: 367 LHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSF 419


>BC014194-1|AAH14194.2|  520|Homo sapiens T-box 22 protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/70 (20%), Positives = 26/70 (37%)
 Frame = +3

Query: 471 QYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFLARNYAI*GSDQA 650
           +Y++  + W    N D L ++PR   H    C  + ++     F      N  +      
Sbjct: 153 RYVYHSSQWMVAGNTDHLCIIPRFYVHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHI 212

Query: 651 EIRGRHVYSP 680
            ++  H Y P
Sbjct: 213 ILQSMHKYKP 222


>AY035371-1|AAK63189.1|  520|Homo sapiens T-box transcription factor
           TBX22 protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/70 (20%), Positives = 26/70 (37%)
 Frame = +3

Query: 471 QYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFLARNYAI*GSDQA 650
           +Y++  + W    N D L ++PR   H    C  + ++     F      N  +      
Sbjct: 153 RYVYHSSQWMVAGNTDHLCIIPRFYVHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHI 212

Query: 651 EIRGRHVYSP 680
            ++  H Y P
Sbjct: 213 ILQSMHKYKP 222


>AL034346-1|CAI22285.1|  444|Homo sapiens forkhead box F2 protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 453 IHILFSQYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTF 611
           +H   S Y  +Q+Y      ED  + LPR   H T VC    +V  +    +F
Sbjct: 367 LHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSF 419


>AL031000-2|CAI43070.1|  520|Homo sapiens T-box 22 protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/70 (20%), Positives = 26/70 (37%)
 Frame = +3

Query: 471 QYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFLARNYAI*GSDQA 650
           +Y++  + W    N D L ++PR   H    C  + ++     F      N  +      
Sbjct: 153 RYVYHSSQWMVAGNTDHLCIIPRFYVHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHI 212

Query: 651 EIRGRHVYSP 680
            ++  H Y P
Sbjct: 213 ILQSMHKYKP 222


>AL031000-1|CAI43069.1|  400|Homo sapiens T-box 22 protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/70 (20%), Positives = 26/70 (37%)
 Frame = +3

Query: 471 QYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFLARNYAI*GSDQA 650
           +Y++  + W    N D L ++PR   H    C  + ++     F      N  +      
Sbjct: 33  RYVYHSSQWMVAGNTDHLCIIPRFYVHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHI 92

Query: 651 EIRGRHVYSP 680
            ++  H Y P
Sbjct: 93  ILQSMHKYKP 102


>AF251684-1|AAG23749.1|  400|Homo sapiens TBXX T-box containing
           protein protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 14/70 (20%), Positives = 26/70 (37%)
 Frame = +3

Query: 471 QYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFLARNYAI*GSDQA 650
           +Y++  + W    N D L ++PR   H    C  + ++     F      N  +      
Sbjct: 33  RYVYHSSQWMVAGNTDHLCIIPRFYVHPDSPCSGETWMRQIISFDRMKLTNNEMDDKGHI 92

Query: 651 EIRGRHVYSP 680
            ++  H Y P
Sbjct: 93  ILQSMHKYKP 102


>AF084939-1|AAD19875.1|  444|Homo sapiens forkhead transcription
           factor protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 453 IHILFSQYIFQQTYWSCLVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTF 611
           +H   S Y  +Q+Y      ED  + LPR   H T VC    +V  +    +F
Sbjct: 367 LHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHSTPVCDRKDFVLNFNGISSF 419


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,033,938
Number of Sequences: 237096
Number of extensions: 2206538
Number of successful extensions: 12516
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12513
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -