Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C14
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006712-1|AAK39323.1| 288|Caenorhabditis elegans Hypothetical ... 212 3e-55
Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z93394-5|CAB61035.1| 447|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical... 30 2.1
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 30 2.1
AL117203-23|CAB61044.1| 447|Caenorhabditis elegans Hypothetical... 30 2.1
Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical pr... 28 6.4
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 28 8.4
U00034-4|AAA50642.1| 554|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AC006712-1|AAK39323.1| 288|Caenorhabditis elegans Hypothetical
protein Y119C1B.4 protein.
Length = 288
Score = 212 bits (517), Expect = 3e-55
Identities = 105/187 (56%), Positives = 133/187 (71%)
Frame = -3
Query: 663 YPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAVTIADPHSQGKTNRFV 484
YP+FL P RN+L+E+LER DML+RR IDIPEFYVGSI+AVT +D + K +RFV
Sbjct: 49 YPDFLQSPVWNRRNALKEELERQDMLERRMNIDIPEFYVGSIVAVTSSDKNLGSKEHRFV 108
Query: 483 GICIERKGCGLRAEFTLRNVVDHQGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDAL 304
GICI R+ GL +FTLRN +++ GVEV YDLY+PTI KI+ L++EKRLD+ L YL DAL
Sbjct: 109 GICIRREKEGLLHQFTLRNTIENIGVEVVYDLYNPTIKKIETLKLEKRLDNDLSYLVDAL 168
Query: 303 PEYSTFSFDMDPEILPEGTPVPINPVKVELKPKPWLERWERQELQGISNIEQYLTKKDKV 124
PEYSTF F M+P+ P GTP+P+N KV+LK PW RWE ++GI + T K
Sbjct: 169 PEYSTFDFHMEPQAHPAGTPIPVNECKVKLKTPPWTRRWEVASVRGIEDTWTQATPWFK- 227
Query: 123 RRELRKT 103
R+L KT
Sbjct: 228 -RKLHKT 233
>Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical
protein K11H3.4 protein.
Length = 717
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -3
Query: 708 RRPXKVNPLLENRHAYPEFLPDPNPKWRNSLREKLERADMLKRRNQIDIPEFYVGSILAV 529
R+P P++ P F PD N + ++ E + R+ ++ ++ + +G+++ +
Sbjct: 117 RKPDFRFPIINPALILPGFNPDTNVNFSETVGEFINRSKGFVKKPNLEQIKAVIGAVIDI 176
Query: 528 TIADPHSQGKTNR 490
A +S K NR
Sbjct: 177 KAAVEYSSMKANR 189
>Z93394-7|CAD59169.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 47 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 105
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 617 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 675
>Z93394-5|CAB61035.1| 447|Caenorhabditis elegans Hypothetical
protein Y48E1C.1a protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 298 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 356
>AL117203-25|CAD59172.1| 196|Caenorhabditis elegans Hypothetical
protein Y48E1C.1c protein.
Length = 196
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 47 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 105
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 617 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 675
>AL117203-23|CAB61044.1| 447|Caenorhabditis elegans Hypothetical
protein Y48E1C.1a protein.
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 414 QGVEVRYDLYDPTIHKIQVLRVEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVP 238
Q E R + +PT +I+ R+++ + D + ++ + F+ + DP P PVP
Sbjct: 298 QAEEHRSSIVEPTKDRIEKERLDRLVPDDEEFENASVDSFDNFNAEPDPAPAPALAPVP 356
>Z81458-5|CAB03825.2| 252|Caenorhabditis elegans Hypothetical
protein C03E10.6 protein.
Length = 252
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 249 FLQVVFPGPYQMKKCYTLAKHHADKIIYHQDAFQ 350
F V+FP + +CY HH+D I+Y+ D+++
Sbjct: 7 FFVVLFPA---LMECYR--SHHSDDIVYYPDSYE 35
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 504 LVNEDQLLLLPR*TQHKTQVCQSDFYVSTYPPFPTFL 614
L+N +L+ L + H T + S F V PP PT +
Sbjct: 116 LLNMSKLITLNQAHSHPTSIAPSSFQVPVIPPPPTLV 152
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 387 YDPTIHKIQVLR-VEKRLDDKLFYLRDALPEYSTFSFDMD 271
Y P +HKI L+ VE + DD+L+Y L E +MD
Sbjct: 160 YGPEMHKILKLKSVEDKDDDQLYYTMIYLDEKLRKELNMD 199
>U00034-4|AAA50642.1| 554|Caenorhabditis elegans Hypothetical
protein C06E8.5 protein.
Length = 554
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 351 VEKRLDDKLFYLRDALPEYSTFSFDMDPEILPEGTPVPINPVKVELKPK 205
+++ LDD F R+ L M +IL +G P+PI+P+ +KPK
Sbjct: 482 LQEELDDAGFLSREILQR-------MVNDILRQGIPIPIHPLFKLVKPK 523
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,732,358
Number of Sequences: 27780
Number of extensions: 362727
Number of successful extensions: 1186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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