Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C12
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 33 0.24
02_03_0131 - 15576422-15577021 31 0.73
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 30 1.7
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 30 2.2
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 30 2.2
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 29 2.9
04_01_0363 + 4754650-4755912 29 3.9
10_08_0500 - 18357828-18358649 29 5.2
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 29 5.2
09_04_0096 - 14563288-14563614,14563717-14564048,14564137-14564356 28 6.8
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 28 6.8
08_02_0402 - 16769239-16769504,16769842-16770016,16772762-167730... 28 6.8
07_01_1114 + 10294271-10294379,10296537-10296958,10297101-10297319 28 6.8
02_02_0240 + 8196140-8198248,8198381-8198650 28 6.8
02_01_0630 - 4724316-4724945,4725083-4726012 28 6.8
01_06_0464 + 29571791-29572240 28 6.8
12_02_1222 + 27145264-27148287 28 9.0
06_01_1068 + 8715714-8716799,8716899-8717159 28 9.0
06_01_0734 + 5419951-5420475 28 9.0
02_05_0530 - 29804939-29805547,29805658-29805885,29805978-298062... 28 9.0
01_01_0905 + 7116121-7116236,7116285-7116339,7116948-7117005,711... 28 9.0
>01_06_1507 - 37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = -1
Query: 518 GTRRYDEPPYD-DRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGR-GGPAPVAGGY 345
G + PY D H+D R + P +H G+ Y S GR P P AGGY
Sbjct: 949 GRDNHGRYPYARDNHHDSRGRV----PPYHQSGGNSYQSHSAPSAGPGRYAQPPPYAGGY 1004
Query: 344 ERDHYVPQY 318
R + Y
Sbjct: 1005 GRSYQPAPY 1013
>02_03_0131 - 15576422-15577021
Length = 199
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -3
Query: 318 HATSIGTRGRSATGP---RHVRGRRPAPVLAATDHE 220
H+ S RGRS+ P RH R R +P AATDH+
Sbjct: 77 HSHSHSHRGRSSPSPDAGRHKRRRDGSPAAAATDHK 112
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 30.3 bits (65), Expect = 1.7
Identities = 37/135 (27%), Positives = 44/135 (32%), Gaps = 9/135 (6%)
Frame = -1
Query: 737 APPPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRRGFALMDRGPRDXXXXXXXXX 558
APP A Y P V GY PP+AP YA G+A P
Sbjct: 38 APPTIPASYASAPPYSVGGYSDQPPSAP---SYAPPPQYAGYAPPYNNPNPAPYPPESSP 94
Query: 557 PDERYQNHISVVEGTRRYDEP---------PYDDRHYDERAQYERPRPAHHIPNGDMYSR 405
Y ++ G P PYD +Y Y+ P A + GD
Sbjct: 95 APAPYYSYPPTAAGVATQHAPAAEPSPAPLPYDAPYY---GGYQPPPTAGY---GDDDYL 148
Query: 404 RSPAPMYSGRGGPAP 360
A YSG GG P
Sbjct: 149 NEGAYAYSGDGGSEP 163
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 151 MRTIKTKRLHFXTNLMFLTEDAR*GESNEMMLTGGPRKXGKRDLFQN 11
+RTIK + L +LTE+ R + +++L G RK D+ +N
Sbjct: 1700 LRTIKPRLLSVSCQNKYLTEEMRANDLMDILLKMGVRKLSGHDIIKN 1746
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 734 PPPRDAPYMRDRPGPVRGYERGPPAAP 654
PPPR P + P P R ++ PP P
Sbjct: 113 PPPRKKPQFQPPPQPPRAWDPSPPPPP 139
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 473 RSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRT 637
RS GR + + P P + R AP VH G + R+H P R+
Sbjct: 66 RSRGRRHKRYSEAPAPAPAPVPAHQARSEAPAPLVHVPRKGMPSTHRSHIAPARS 120
>04_01_0363 + 4754650-4755912
Length = 420
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 464 RARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP----*GRDPSARTHAGPR 631
R RR+GGR +V PPP+ G R G V +RP G +P+ R G R
Sbjct: 23 RQRRTGGRSTVDRDHVGGPPPVHGIDGPDRPGADR-TVRRRPGSARLGTNPAGRPWQGRR 81
>10_08_0500 - 18357828-18358649
Length = 273
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 434 GEQVSGVHTVRARRSGGRHREAHRNVAYPPPLRC 535
G V V+ A R GGRH H + PPP +C
Sbjct: 74 GGGVEAVNAAAAPRQGGRH-AGHPPLPRPPPRQC 106
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 470 ERAQYERPR-PAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHY 330
E+++ RPR P G Y RR P Y RG GGY RD Y
Sbjct: 181 EKSRRGRPRTPTPGSYLGHRYDRREPRGRYRSRG------GGYGRDEY 222
>09_04_0096 - 14563288-14563614,14563717-14564048,14564137-14564356
Length = 292
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 455 ERPRPAHHIPNGDMYSRRSPAPMYSGRG 372
+R HH+P+ D + R SPAP S G
Sbjct: 203 DRGTTEHHLPSDDAHLRSSPAPANSVDG 230
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = -1
Query: 497 PPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQY 318
PP + Y+ P +H N Y +P P +G A A GY+ P Y
Sbjct: 315 PPPPSAYQGNNPGYQGGGPGYHGGNPPPYQAGNPPPYQAGNPVFAGGAPGYQGQGGNPSY 374
Query: 317 MQ 312
Q
Sbjct: 375 QQ 376
>08_02_0402 -
16769239-16769504,16769842-16770016,16772762-16773028,
16773156-16773368
Length = 306
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 437 EQVSGVHTVRARRSGGRHREAHRNV 511
++V+G H R RR+G RH +A N+
Sbjct: 90 KEVNGAHERRRRRTGQRHGKAFANI 114
>07_01_1114 + 10294271-10294379,10296537-10296958,10297101-10297319
Length = 249
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 242 TGAGRRPRTCRGPVALRPRVPMEVAC 319
TG GRRP RGP A+ P C
Sbjct: 7 TGGGRRPPCRRGPAAVAPPARFSCRC 32
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 734 PPPRDAPYMRDRPGPVRGYERGPP 663
PPP PYM PGP R Y PP
Sbjct: 622 PPPGQNPYM---PGPPRPYSMPPP 642
>02_01_0630 - 4724316-4724945,4725083-4726012
Length = 519
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 245 GAGRRPRTCRGPVALRPRVPMEVACIVVHSD--LSRNLRPLELDL 373
G+GRR C G + +P + + +A ++ H D L ++P ELD+
Sbjct: 448 GSGRR--MCPGIMFAQPNIELALATLLYHFDWSLPAGVKPSELDM 490
>01_06_0464 + 29571791-29572240
Length = 149
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 458 TVRARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAG 625
T R R GG R HR V + L +G G P V +R ++R H G
Sbjct: 58 TARCYRGGGELRGLHRRVRHRAGL-LRAGEEGTGGAVPGVGRRRGSTSAASRPHGG 112
>12_02_1222 + 27145264-27148287
Length = 1007
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 434 HIPNGDMYSRRSPAPMYSGRGG 369
H+PNG +Y R GRGG
Sbjct: 784 HLPNGSLYERLHEGQKLGGRGG 805
>06_01_1068 + 8715714-8716799,8716899-8717159
Length = 448
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 485 RHREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHA 622
RH + PPPL SGS R+ + PA + R P R+HA
Sbjct: 57 RHERLRLRPSSPPPLVPPSGSGRRDEAVPAAWFKRKARTP--RSHA 100
>06_01_0734 + 5419951-5420475
Length = 174
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 413 YSRRSPAPMYSGRGGPAPVAGG 348
Y+ PAP Y G PA VAGG
Sbjct: 11 YNGHQPAPYYYGYAQPARVAGG 32
>02_05_0530 -
29804939-29805547,29805658-29805885,29805978-29806261,
29807095-29807199,29807648-29808155
Length = 577
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 740 HAP--PPRDAPYMRDRPGPVRGYERGPPAAPYDERYAYGEDRR 618
H P PP+ APY G VR G P + +A GE RR
Sbjct: 475 HEPRLPPQPAPYPEFAAGLVRQDSFGGGELPRQDSFAIGELRR 517
>01_01_0905 +
7116121-7116236,7116285-7116339,7116948-7117005,
7117637-7117731,7117823-7117926,7118310-7118438,
7118845-7120633,7120849-7121054,7121865-7121949,
7122183-7122422
Length = 958
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -1
Query: 554 DERYQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGR 375
DE +N E T+ + +D H DE+ ER + N D+ PA +
Sbjct: 733 DENKENLGYTTEQTKD-GQSAGNDEHMDEQTTGERSSATNVATNDDLSGNLQPAGILIEH 791
Query: 374 GGPAPVAGGYERD 336
G P++ Y ++
Sbjct: 792 SGDDPISPDYGKN 804
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,764,758
Number of Sequences: 37544
Number of extensions: 479008
Number of successful extensions: 1705
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -