Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C12
         (743 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124574-1|BAC85889.1|  171|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AF063601-1|AAG43160.1|  647|Homo sapiens brain my043 protein pro...    31   5.8  

>AK124574-1|BAC85889.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42583 fis, clone BRACE3009090. ).
          Length = 171

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 45  GPPVNIISLLSPHLASSVKNIRFVXKCRRFVLIVLIY 155
           GPP  +  L+  +L SS  N   V K RRF L+ L Y
Sbjct: 29  GPPAYVFLLILSYLPSSPHNSHSVTKSRRFYLLNLSY 65


>AF063601-1|AAG43160.1|  647|Homo sapiens brain my043 protein
           protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -1

Query: 545 YQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYS 381
           Y  H+ +++ T+   EP  D   Y E A+ E+P P H     D      P  ++S
Sbjct: 150 YLLHVDLIKETKLSAEPAPDFSDYSEMAKVEQPVPDHSELVEDSSPDSEPVDLFS 204


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,723,361
Number of Sequences: 237096
Number of extensions: 2375778
Number of successful extensions: 10202
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10199
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)