Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C08
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 157 8e-40
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 155 4e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 5e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 61 1e-10
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 60 2e-10
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 36 0.004
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.048
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.085
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.11
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 30 0.20
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.20
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.34
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.45
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.45
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 0.60
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 28 0.79
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 28 1.0
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 27 1.4
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 1.8
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 1.8
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 2.4
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.2
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 3.2
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.2
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.2
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.2
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.2
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 26 4.2
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 4.2
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 4.2
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 4.2
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 4.2
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 4.2
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 5.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 5.6
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 5.6
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 5.6
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 25 5.6
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 5.6
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 7.3
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 25 7.3
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 7.3
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 25 9.7
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 9.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 157 bits (382), Expect = 8e-40
Identities = 72/121 (59%), Positives = 93/121 (76%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S+++
Sbjct: 490 EKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRN 549
Query: 364 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 185
+++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKELEG+ NPI+ K+Y
Sbjct: 550 SLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIY 609
Query: 184 Q 182
Q
Sbjct: 610 Q 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 155 bits (376), Expect = 4e-39
Identities = 71/121 (58%), Positives = 93/121 (76%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S+++
Sbjct: 490 EKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRN 549
Query: 364 TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKMY 185
+++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKELE + NPI+ K+Y
Sbjct: 550 SLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIY 609
Query: 184 Q 182
Q
Sbjct: 610 Q 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 111 bits (268), Expect = 5e-26
Identities = 53/117 (45%), Positives = 79/117 (67%), Gaps = 2/117 (1%)
Frame = -2
Query: 529 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-ED 353
K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +D
Sbjct: 525 KPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDD 584
Query: 352 EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQKELEGICNPIITKMY 185
E+L K+ DKQ +LD D +WL+ + A KEE+E ++++L+ + +PI K+Y
Sbjct: 585 EQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 60.9 bits (141), Expect = 1e-10
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
+K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S
Sbjct: 533 DKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIES 591
Query: 364 TME--DEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITK 191
++ +KL ++ + + I D K ++ E+ + K E++ + +
Sbjct: 592 NLDIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFES 651
Query: 190 MYQ 182
+Y+
Sbjct: 652 VYK 654
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 60.5 bits (140), Expect = 2e-10
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
EK+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++
Sbjct: 495 EKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIET 554
Query: 364 TMEDEKLKEKISDSDKQTI---LDKCNDTIKWLDSN 266
T+ + + K+ DK I L +C ++ D+N
Sbjct: 555 TISEPNVMMKLKRGDKSKIEAQLAECMSQLELEDTN 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 35.9 bits (79), Expect = 0.004
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Frame = -2
Query: 541 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 365
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 364 TMED--EKLKEKISDSDKQTILDKCNDTIKWL-DSNQLADKEEYEHKQKELEGICNPI 200
++D + S + +L K D WL + + K Y K ++L + PI
Sbjct: 593 KLDDIYAPFTNEEESSKFKEMLTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.048
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = -2
Query: 481 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 302
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 301 K 299
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.085
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -2
Query: 499 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 320
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 319 KQTILDKCNDTIK 281
+ LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = -2
Query: 532 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 353
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 352 EKLKEKISD 326
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.3 bits (65), Expect = 0.20
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -2
Query: 499 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKL-KEKISDS 323
K R +E I + EAE+ + E ++Q+ Q K E + K E EKL KE+I
Sbjct: 82 KQRAQEERIRQ--KEAERLKREKERQQRE-QEKKLREQEKIAAKKMKELEKLEKERIRLQ 138
Query: 322 DKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 224
++Q ++ + ++ + Q +E+ +K+++
Sbjct: 139 EQQRRKEERDQKLREKEEAQRLRQEQILNKERQ 171
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.20
Identities = 23/90 (25%), Positives = 43/90 (47%)
Frame = -2
Query: 487 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI 308
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDV--- 1661
Query: 307 LDKCNDTIKWLDSNQLADKEEYEHKQKELE 218
K + + A YE K ++L+
Sbjct: 1662 --KLKKVVAETEFRSKAKISVYEKKTRDLQ 1689
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/77 (23%), Positives = 37/77 (48%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
++ TNK ++T N + ++EIE + + + + E I K E +KS
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI-TKEQFE----QLKS 1491
Query: 364 TMEDEKLKEKISDSDKQ 314
E E+ +++++DS +
Sbjct: 1492 --EKERTEKELADSKNE 1506
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.34
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -2
Query: 511 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 332
+ +K SKE ++ EAE+ E +E + + + S K +++ LK K
Sbjct: 433 LEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE--LKAKA 490
Query: 331 SDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK---ELEGICN 206
D++++ D +K+ L + EY +QK + E I N
Sbjct: 491 EDAERRNDFTLAAD-LKYYGIPDLQKRIEYLEQQKRKADAEAIAN 534
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.1 bits (62), Expect = 0.45
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -2
Query: 529 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 350
K N D+ + +EE E ++EK ++ K + KNA ++ M DE
Sbjct: 85 KANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDE 140
Query: 349 KLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEYEHKQKE 224
+ E S K+ K +D + LD + E+ + K+K+
Sbjct: 141 EESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKK 183
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 499 KGRLSKEEIERMVNEAEKYRNEDD 428
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 343 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 218
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 28.3 bits (60), Expect = 0.79
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 526 ENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------ESYCFSMK 368
EN++ I N L K +++ R ++ +N+++ +++ A + L ++ +
Sbjct: 800 ENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFR 859
Query: 367 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKE 248
+DEKLK+ D ++ N+ + D ++D E
Sbjct: 860 KFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -2
Query: 481 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 305
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 304 DKCNDTIKWLDSNQLADKEEYEHKQK 227
+ + + + D + + K+K
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRK 575
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 1.4
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = -2
Query: 499 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 329
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 328 DSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 218
D D++ DT+ D NQ+ +E E QKE++
Sbjct: 281 DKDQE------QDTVS--DKNQI---DEIEKGQKEVD 306
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 517 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 338
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 337 KISDSDKQTILDKCNDTIK 281
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 466 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 362
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 2.4
Identities = 21/88 (23%), Positives = 35/88 (39%)
Frame = -2
Query: 463 VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTI 284
+NE + Y + + Q +T + L S C + S L + D + +L C I
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 283 KWLDSNQLADKEEYEHKQKELEGICNPI 200
DS + ++E K + I N I
Sbjct: 888 CVKDSIKRLGDNKFEDKSLRICTIPNSI 915
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 436 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 275
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 526 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 356
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = -2
Query: 484 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 332
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 331 SDSDKQTILDKCND 290
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 364 TMEDEKLKEKISDSDK 317
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 481 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 311
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 505 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 329
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 328 DSDKQT 311
+D+ T
Sbjct: 695 -TDRLT 699
Score = 26.2 bits (55), Expect = 3.2
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = -2
Query: 493 RLSKEEIERMVNEAEKYRNEDDKQKETIQAK-NALESYCFSMKSTMEDEKLKEKISDSDK 317
+L++E +ER+ E ++YR + + E K +LE ++ + L+ + D
Sbjct: 950 KLAEEMVERVKTEYDEYRLQTSESLEKNHLKITSLEQRIVILQDEIASSSLRCENITKDS 1009
Query: 316 QTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 224
+T + + K L +N+L+ E +H +KE
Sbjct: 1010 ETRVALLLEENKHL-NNELSSHRNAEKQHLEKE 1041
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.2
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 517 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 341
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 340 EKISDSDKQTILDKC 296
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 174 EESPEVCRASRAEHPEPE 121
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -2
Query: 487 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 365
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 544 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 431
++S K + + K EE+E VNE E++R D
Sbjct: 263 KRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -3
Query: 135 HPEPEVPPPGLEALAPPSRRSIKPTFHTTRKPTCNNHL*P 16
H +P +L+PPS R++KP H+ P+ + L P
Sbjct: 169 HLRSSMPLVMANSLSPPSSRALKP-IHSLSNPSTASSLEP 207
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 499 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 389
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 4.2
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 433 DDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLA 257
D ++E I A AL + E+ I +K T+ D+ NDT +WLD +L
Sbjct: 181 DSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQ-NDTKEWLD--KLG 237
Query: 256 DK 251
DK
Sbjct: 238 DK 239
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 484 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 305
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 304 D 302
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 538 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 377
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/73 (21%), Positives = 38/73 (52%)
Frame = -2
Query: 538 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM 359
ST+ + + DK + E+I + ++Y NED+ + +++ A S+ ++ +T+
Sbjct: 387 STSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTI 445
Query: 358 EDEKLKEKISDSD 320
+ + KI +S+
Sbjct: 446 QAKYSNRKIKNSN 458
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 484 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 305
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 304 DKC 296
D C
Sbjct: 754 DGC 756
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 5.6
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 523 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 347
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 346 LKEKISDSDK 317
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 163 RGLLRHPGTSSLLSDCKCLPILSA-CAH 243
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 403 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 278
K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 284 KEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 413
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 490 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 320
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 180 VPEESPEVCRA--SRAEHPEPEVPPPGLEALAPPSRRS 73
V +SP R SR P E P A PPSRR+
Sbjct: 891 VSRDSPRYSRGGYSRGSVPPRETLAPSKGAYVPPSRRN 928
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 7.3
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = -2
Query: 502 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 353
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 352 ---EKLKEKISDSDKQTILDKCND 290
EK++EK+++ DK ++ D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 9.7
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = -2
Query: 463 VNEAEKYRNEDDKQK-ETI----QAKNALE-SYCFSMKSTME-DEKLKEKISDSDKQTIL 305
V E K R+ED+ QK ET+ + K +E S+ S + E +K++ S+ K +
Sbjct: 463 VEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVTFSEDVKKEPSEEKKLEVS 522
Query: 304 DKCNDTIKWLDSNQLADKEE-YEHKQKE 224
D+ +S ++ +KE Y K K+
Sbjct: 523 DEAPKAAPLAESKKVEEKEPFYVSKDKK 550
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 376 SMKSTMEDEKLKEKISD 326
S+K MEDEKL EK+++
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,963,764
Number of Sequences: 5004
Number of extensions: 37361
Number of successful extensions: 225
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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