Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C07
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242...    31   1.00 
07_01_0976 + 8226194-8226473,8227116-8227291,8227366-8227486,822...    28   7.0  
09_06_0280 + 22010270-22011407,22011890-22013097                       28   9.3  
07_03_1760 - 29289997-29290377,29290539-29290755,29291152-292939...    28   9.3  
06_03_0405 - 20464701-20466287                                         28   9.3  

>06_01_0336 +
           2427017-2427121,2427585-2427662,2427889-2427960,
           2428105-2428671,2428822-2428935,2431308-2432246
          Length = 624

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 246 HTRYESAGESFSAVGPYKYPW 308
           HTRY S G +FS  GP   PW
Sbjct: 435 HTRYPSTGFTFSGSGPSSAPW 455


>07_01_0976 +
           8226194-8226473,8227116-8227291,8227366-8227486,
           8228684-8228757,8229269-8229332,8229969-8230039,
           8230279-8230368,8230491-8230661,8231668-8231739
          Length = 372

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 348 PHTPRATYARVPVGGSAPGPKKNR 419
           P  P AT A  P+GGS P P++ R
Sbjct: 49  PRGPFATAADTPLGGSLPEPEEER 72


>09_06_0280 + 22010270-22011407,22011890-22013097
          Length = 781

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 486 VSLVLIDETSRRAVCFGIELRELDFFSGRVPNLLRVPA 373
           V + ++D   R  V   I + EL +F G   NLL+ PA
Sbjct: 206 VKVTIMDNEYRGEVPEAIRIAELGWFDGLAANLLKKPA 243


>07_03_1760 -
           29289997-29290377,29290539-29290755,29291152-29293953,
           29294134-29294178,29294274-29294358,29294791-29294875,
           29296429-29296530,29296747-29296851,29296940-29297029,
           29297163-29297258
          Length = 1335

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 140 TAINSSSQSRDEVILQANARTTIRTAIYAKIEERLAHTLRECRRVV 277
           TA++ S+ +R+  + +AN R T   A   K  + L++  R CR+ V
Sbjct: 434 TAVDQSNTARELTLCEANLRLT-GNAASKKNSQVLSYNRRRCRKSV 478


>06_03_0405 - 20464701-20466287
          Length = 528

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 122 VMKLVYGKLSAFSLLAIPWTADVNKYQYPFVKKYP 18
           +  + Y    A   LA+ W+ D+ K+  P+V K P
Sbjct: 428 IQYITYWNGDANGTLALKWSRDLYKFMEPYVSKNP 462


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,806,812
Number of Sequences: 37544
Number of extensions: 430164
Number of successful extensions: 1213
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)