Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C07
(759 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 32 0.017
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 31 0.051
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 30 0.067
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 30 0.089
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.27
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 28 0.27
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 27 0.48
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 27 0.63
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 0.63
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 27 0.83
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 27 0.83
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 26 1.1
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 26 1.1
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.5
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 1.9
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 25 1.9
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 2.5
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 2.5
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 24 4.4
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 32.3 bits (70), Expect = 0.017
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP K+ + + KPGK EP+SFRPI L
Sbjct: 474 FPQPWKKQRLVLLPKPGKSPGEPSSFRPICL 504
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 593 LIDKQFGFRAKHSWVQQVHRLTD 525
L ++QFGFR S +Q + ++ D
Sbjct: 532 LSEQQFGFRRGRSTLQAIQQVVD 554
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 30.7 bits (66), Expect = 0.051
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP K+ + + KPGK +P+SFRPI L
Sbjct: 469 FPEQWKKQRLVLLPKPGKPPGDPSSFRPICL 499
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 0.067
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 620 NAFIGLKSILIDKQFGFRAKHSWVQQVHRLTDYILV 513
NA I + L D QFGFR++ S V + R+ D + V
Sbjct: 496 NAHIEEVNGLSDDQFGFRSRRSTVDAIQRVVDIVSV 531
Score = 26.2 bits (55), Expect = 1.1
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP K + I KP K EP S RPI L
Sbjct: 449 FPDEWKRQRLVLIPKPNKPPGEPGSVRPICL 479
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.9 bits (64), Expect = 0.089
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP++ K + I KPGK P++FRP+ L
Sbjct: 506 FPSMWKIQKLVLIPKPGKPPGHPSAFRPLGL 536
Score = 24.2 bits (50), Expect = 4.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 593 LIDKQFGFRAKHSWVQQV 540
L D+QFGFR K S V +
Sbjct: 562 LSDRQFGFRKKRSTVDAI 579
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 0.27
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FPA K + + KPGK E +SFRP+ +
Sbjct: 485 FPAHWKIQRLVLLQKPGKPPGESSSFRPLGM 515
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 28.3 bits (60), Expect = 0.27
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP K + + K GK EP+S+RPI L
Sbjct: 465 FPDAWKRQQLVLLTKSGKPPGEPSSYRPICL 495
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 27.5 bits (58), Expect = 0.48
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 599 SILIDKQFGFRAKHSWVQQVHRLTDYIL 516
+I+ QFGFR S Q+HR+T+ I+
Sbjct: 31 NIIPKSQFGFRPSLSTTHQLHRVTNNIV 58
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 27.1 bits (57), Expect = 0.63
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FPA K + I KPGK S+RP+ + A
Sbjct: 465 FPAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDA 498
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.63
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FP K + + KPGK E +S+RP+ + A
Sbjct: 487 FPQQWKRQRLVLLPKPGKAPGESSSYRPLCMLDA 520
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 26.6 bits (56), Expect = 0.83
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 738 KETDVTSIHKPGKLKNEPASFRPISL 661
K+ V SI KPGK E S RPI L
Sbjct: 459 KQRLVLSIPKPGKRPGESGSSRPICL 484
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 26.6 bits (56), Expect = 0.83
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FFP K + + KPGK ++ ++ RP++L
Sbjct: 444 FFPIPWKRQKLVLLPKPGKPPDDASALRPLAL 475
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FP+ K + + K GK E +S+RP+S+ A
Sbjct: 479 FPSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDA 512
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 26.2 bits (55), Expect = 1.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FP K + + KPGK E +S+RP+ + A
Sbjct: 540 FPPQWKRQRLVLLPKPGKPPGESSSYRPLCMLDA 573
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.8 bits (54), Expect = 1.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FP K+ + I KPGK +SFRPI L
Sbjct: 471 FPDEWKKQKLALIPKPGKPPGLASSFRPILL 501
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FPA K + + KPGK S+RP+ + A
Sbjct: 532 FPAPWKRQRLVLLPKPGKPPGSNGSYRPLCMLDA 565
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 634 TAITQTPSSA*KAFSSTNSSDSAQNTR 554
T + TPSS+ + SST SS S+ +++
Sbjct: 536 TTVVSTPSSSTTSSSSTTSSSSSSSSK 562
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 25.0 bits (52), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 753 FPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
FPA K + + K GK E +S+RP+ + A
Sbjct: 525 FPAQWKRQRLVLLPKQGKPPGESSSYRPLCMLDA 558
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 593 LIDKQFGFRAKHSWVQQVHRLTD 525
L D+QFGFR S V + R+ +
Sbjct: 583 LSDRQFGFRRGRSTVSAIQRVVE 605
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 676 PSDQPLPSVRLIKPTAITQTPSSA*KAFSSTNSSDSAQNT 557
P D R KP+ + TP + SS++SS SA +T
Sbjct: 769 PPDGSGSGSRCSKPSVTSTTPPTPASLSSSSSSSSSASST 808
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 24.2 bits (50), Expect = 4.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 692 FLSFPGLCMLVTSVSFY 742
+L+FP CM + SFY
Sbjct: 172 YLTFPACCMYIPFTSFY 188
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,823
Number of Sequences: 2352
Number of extensions: 16166
Number of successful extensions: 43
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -