Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C07
(759 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 7e-04
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 41 0.002
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 38 0.011
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 38 0.015
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 38 0.015
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 38 0.015
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 36 0.060
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 36 0.060
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.060
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 36 0.060
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 36 0.060
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 36 0.079
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 33 0.32
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 32 0.98
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 32 0.98
AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-P... 31 1.3
AY118335-1|AAM48364.1| 440|Drosophila melanogaster LD24788p pro... 30 3.0
AE013599-3324|AAF46795.1| 440|Drosophila melanogaster CG6437-PA... 30 3.0
AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p pro... 29 5.2
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 29 5.2
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 29 5.2
X78486-1|CAA55238.1| 395|Drosophila melanogaster actin related ... 29 6.9
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 29 6.9
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 42.3 bits (95), Expect = 7e-04
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
+FP K ++ IHKPGK + EPAS+RPISL P+
Sbjct: 487 YFPYQWKLGIISMIHKPGKPEREPASYRPISLLPS 521
Score = 33.1 bits (72), Expect = 0.42
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 602 KSILIDKQFGFRAKHSWVQQVHRLTDYIL 516
+ I + QFGFRA H V+Q+HR+ + IL
Sbjct: 541 QGITPEHQFGFRAGHCTVEQLHRVVEQIL 569
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -2
Query: 602 KSILIDKQFGFRAKHSWVQQVHRLTDYIL 516
+ IL D QFGFR HS V+QVHRLT +IL
Sbjct: 542 RRILPDHQFGFRQGHSTVEQVHRLTKHIL 570
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
FFP K + IHKPGK + P S+RPISL
Sbjct: 488 FFPKQWKMAAILMIHKPGKPEESPESYRPISL 519
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK NEP S+RPISL
Sbjct: 544 YYPEAWKHAQVKMILKPGKSSNEPKSYRPISL 575
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 605 QFGFRKEHGTEQQIARVTQFIL 626
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
+FP K++ + I KPGK K +P+S+RPISL
Sbjct: 483 YFPQKWKKSTIVMIPKPGKDKTQPSSYRPISL 514
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 605 LKSILIDKQFGFRAKHSWVQQVHRLTDYI 519
+ + L QFGFR KH ++QV+R+T I
Sbjct: 536 INNTLPTHQFGFREKHGTIEQVNRITSEI 564
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.9 bits (84), Expect = 0.015
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK NEP S+RPISL
Sbjct: 532 YYPEAWKHAQVKMILKPGKSANEPRSYRPISL 563
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 593 QFGFRKEHGSEQQIARVTQFIL 614
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
+FP K++ + I KPGK K +P+S+RPISL
Sbjct: 483 YFPQKWKKSTIVMIPKPGKDKTQPSSYRPISL 514
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 605 LKSILIDKQFGFRAKHSWVQQVHRLTDYI 519
+ + L QFGFR KH ++QV+R+T I
Sbjct: 536 INNTLPTHQFGFREKHGTIEQVNRITSEI 564
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 35.9 bits (79), Expect = 0.060
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK N+P S+RPISL
Sbjct: 416 YYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 447
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 477 QFGFRKEHGTEQQIARVTQFIL 498
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.060
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK N+P S+RPISL
Sbjct: 532 YYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 593 QFGFRKEHGTEQQIARVTQFIL 614
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.060
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK N+P S+RPISL
Sbjct: 532 YYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 593 QFGFRKEHGTEQQIARVTQFIL 614
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 35.9 bits (79), Expect = 0.060
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK N+P S+RPISL
Sbjct: 494 YYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 525
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 555 QFGFRKEHGTEQQIARVTQFIL 576
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.060
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
++P K V I KPGK N+P S+RPISL
Sbjct: 532 YYPDAWKHAQVKMILKPGKSVNDPKSYRPISL 563
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H QQ+ R+T +IL
Sbjct: 593 QFGFRKEHGTEQQIARVTQFIL 614
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 35.5 bits (78), Expect = 0.079
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
+FP K + IHK GK + S+RPISL P+
Sbjct: 291 YFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPS 325
Score = 28.7 bits (61), Expect = 9.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H +Q+HR+ ++ L
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFAL 373
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 33.5 bits (73), Expect = 0.32
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISLYPA 652
+FP K + IHK GK + S+RP SL P+
Sbjct: 489 YFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPS 523
Score = 28.7 bits (61), Expect = 9.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 581 QFGFRAKHSWVQQVHRLTDYIL 516
QFGFR +H +Q+HR+ ++ L
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFAL 571
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
+FP K + I KPGK + P S+RPISL
Sbjct: 512 YFPRDWKIAKIVPILKPGKPPDNPESYRPISL 543
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 756 FFPAV*KETDVTSIHKPGKLKNEPASFRPISL 661
+FP K + I KPGK + P S+RPISL
Sbjct: 460 YFPRDWKIAKIVPILKPGKPPDNPESYRPISL 491
>AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-PA
protein.
Length = 659
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 513 YQDVIREAVHLLNPRVFCAESELFV-DENAFQADE 614
Y+DV R HL+ PR+F + ++ +V D F ADE
Sbjct: 383 YEDVYRYERHLVFPRLFASNAQDYVADHTMFNADE 417
>AY118335-1|AAM48364.1| 440|Drosophila melanogaster LD24788p
protein.
Length = 440
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -3
Query: 706 WKT*KRTCELPSD-QPLPSVRLIKP 635
+K K++C+LP++ QPLP V ++KP
Sbjct: 35 YKLHKKSCKLPTEAQPLPGVSILKP 59
>AE013599-3324|AAF46795.1| 440|Drosophila melanogaster CG6437-PA
protein.
Length = 440
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -3
Query: 706 WKT*KRTCELPSD-QPLPSVRLIKP 635
+K K++C+LP++ QPLP V ++KP
Sbjct: 35 YKLHKKSCKLPTEAQPLPGVSILKP 59
>AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p
protein.
Length = 527
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 364 PPTRGYP*EVRHPARKKIEFSQLDTET-NSSTRSLVDEHETDGT 492
PP YP + P ++ + S++D + N++ R+++ DGT
Sbjct: 145 PPMAAYPQNIVRPGQQNADSSEVDLDVLNAAIRAVITNKPEDGT 188
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 364 PPTRGYP*EVRHPARKKIEFSQLDTET-NSSTRSLVDEHETDGT 492
PP YP + P ++ + S++D + N++ R+++ DGT
Sbjct: 578 PPMAAYPQNIVRPGQQNADSSEVDLDVLNAAIRAVITNKPEDGT 621
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 364 PPTRGYP*EVRHPARKKIEFSQLDTET-NSSTRSLVDEHETDGT 492
PP YP + P ++ + S++D + N++ R+++ DGT
Sbjct: 578 PPMAAYPQNIVRPGQQNADSSEVDLDVLNAAIRAVITNKPEDGT 621
>X78486-1|CAA55238.1| 395|Drosophila melanogaster actin related
protein protein.
Length = 395
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 380 YPRVGGARGMWDLTICRCWEQTAGP-RIFIGPYRTK 276
YP G WD +C WE T GP ++ I P TK
Sbjct: 73 YPMENGVVRNWD-DMCHVWEYTFGPKKMDIDPTNTK 107
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 599 SILIDKQFGFRAKHSWVQQVHRLTDYI 519
+I+ QFGFR H ++QV+R+T I
Sbjct: 540 NIIPAHQFGFRESHGTIEQVNRITTEI 566
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,317,354
Number of Sequences: 53049
Number of extensions: 713014
Number of successful extensions: 2331
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -