Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_C06
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64860-2|AAB04992.3| 373|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 35 0.055
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 35 0.055
Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 33 0.29
U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified vi... 33 0.29
U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified vi... 33 0.29
AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical ... 33 0.29
Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical pr... 31 0.89
U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical pr... 31 0.89
AC024817-48|AAM97976.1| 401|Caenorhabditis elegans Hypothetical... 31 0.89
AF043699-4|AAB97568.1| 610|Caenorhabditis elegans Serotonin/oct... 31 1.2
U64603-4|AAO61442.1| 410|Caenorhabditis elegans Serotonin/octop... 30 1.6
U64603-3|AAM15552.1| 422|Caenorhabditis elegans Serotonin/octop... 30 1.6
U64603-2|AAB04582.3| 435|Caenorhabditis elegans Serotonin/octop... 30 1.6
U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin recep... 30 1.6
AC084154-13|AAK29875.2| 445|Caenorhabditis elegans Serotonin/oc... 30 1.6
U64601-3|ABC71817.1| 485|Caenorhabditis elegans Temporarily ass... 30 2.1
U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily ass... 30 2.1
U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily ass... 30 2.1
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 29 2.7
U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine recept... 29 2.7
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 29 2.7
U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 29 2.7
U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 29 2.7
U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide re... 29 2.7
U23183-3|AAA64340.3| 496|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical ... 29 3.6
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 29 3.6
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 29 3.6
U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41038-2|AAX88827.1| 635|Caenorhabditis elegans Serotonin/octop... 29 4.8
U41038-1|AAK29709.2| 683|Caenorhabditis elegans Serotonin/octop... 29 4.8
AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin rec... 29 4.8
AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin rec... 29 4.8
Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 6.3
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 6.3
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 28 6.3
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 6.3
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 6.3
Z81579-6|CAB04652.3| 347|Caenorhabditis elegans Hypothetical pr... 28 8.3
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 8.3
U42832-6|AAP40542.2| 342|Caenorhabditis elegans Hypothetical pr... 28 8.3
U42832-5|ABA03119.1| 468|Caenorhabditis elegans Hypothetical pr... 28 8.3
U42832-4|AAA83574.4| 462|Caenorhabditis elegans Hypothetical pr... 28 8.3
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 8.3
>U64860-2|AAB04992.3| 373|Caenorhabditis elegans Hypothetical
protein R106.2 protein.
Length = 373
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y NSA NP LY FLSD+F+K+ K
Sbjct: 305 YINSAANPFLYVFLSDSFQKNIQK 328
>Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical
protein ZK455.3 protein.
Length = 444
Score = 35.5 bits (78), Expect = 0.041
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y+NS +NPILYA +S +F++ F++
Sbjct: 333 YTNSCLNPILYALMSQSFREGFIR 356
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKA 689
Y S +NPILYAF+S NF+ +F A
Sbjct: 393 YCQSCINPILYAFISQNFRSTFKTA 417
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKA 689
Y S +NPILYAF+S NF+ +F A
Sbjct: 393 YCQSCINPILYAFISQNFRSTFKTA 417
>Z68106-2|CAA92126.2| 402|Caenorhabditis elegans Hypothetical
protein F41E7.3 protein.
Length = 402
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 754 SAMNPILYAFLSDNFKKSFLKACTC 680
+A NPILYAF+++ F++ F K C
Sbjct: 304 TAWNPILYAFMNETFREEFAKVVPC 328
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 345 LLQSIDTKIVSSSTSA-HGSRWRRETRTQSRECERPLC---AIRGVKVGGRASSGSTSL 509
L + +D +V S+SA + RW+RE R + C+ LC RG G R + S SL
Sbjct: 57 LTRFLDQYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSL 115
>U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform b
protein.
Length = 420
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y N A+NP+LYA+ ++NF+ +F
Sbjct: 282 YVNCALNPVLYAYRAENFRTAF 303
>U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform a
protein.
Length = 426
Score = 32.7 bits (71), Expect = 0.29
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y N A+NP+LYA+ ++NF+ +F
Sbjct: 282 YVNCALNPVLYAYRAENFRTAF 303
>AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical
protein K10B4.4 protein.
Length = 403
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
YSNSA NPILY LS ++ +F +
Sbjct: 325 YSNSAANPILYNILSQKYRSAFCR 348
>Z82071-2|CAB04918.2| 362|Caenorhabditis elegans Hypothetical
protein W05B5.2 protein.
Length = 362
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFK 707
YS+S +NPILY+FLS F+
Sbjct: 311 YSSSCLNPILYSFLSGRFE 329
>U41276-3|AAA82470.2| 517|Caenorhabditis elegans Hypothetical
protein C52B11.3 protein.
Length = 517
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 757 NSAMNPILYAFLSDNFKKSFLKACTCAAGKDVNATLHVENSVI 629
NS +NP++Y+ S +F+++F + TC + V S++
Sbjct: 455 NSMLNPLIYSRFSRDFRRAFKQILTCQRQQKVKTAFKTPLSLV 497
>AC024817-48|AAM97976.1| 401|Caenorhabditis elegans Hypothetical
protein Y54G2A.35 protein.
Length = 401
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFK 707
YSNSA+NPILYA S +F+
Sbjct: 370 YSNSAVNPILYAAFSRDFR 388
>AF043699-4|AAB97568.1| 610|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 3 protein.
Length = 610
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
Y NSA+NP++Y + F+ F + TC
Sbjct: 525 YLNSALNPVIYTVFNREFRICFKRLLTC 552
>U64603-4|AAO61442.1| 410|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform c
protein.
Length = 410
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF--LKACTCA 677
YSNS +NP++Y + F+ F + AC CA
Sbjct: 361 YSNSTLNPLIYCKYNKEFRIPFREMLACRCA 391
>U64603-3|AAM15552.1| 422|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform b
protein.
Length = 422
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF--LKACTCA 677
YSNS +NP++Y + F+ F + AC CA
Sbjct: 361 YSNSTLNPLIYCKYNKEFRIPFREMLACRCA 391
>U64603-2|AAB04582.3| 435|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 7, isoform a
protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF--LKACTCA 677
YSNS +NP++Y + F+ F + AC CA
Sbjct: 361 YSNSTLNPLIYCKYNKEFRIPFREMLACRCA 391
>U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin receptor
precursor protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NSA+NPI+Y S +F+ +F
Sbjct: 411 YLNSALNPIIYTVFSQDFRAAF 432
>AC084154-13|AAK29875.2| 445|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 4 protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NSA+NPI+Y S +F+ +F
Sbjct: 411 YLNSALNPIIYTVFSQDFRAAF 432
>U64601-3|ABC71817.1| 485|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform c protein.
Length = 485
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
YSNS +NPI+Y + +F++ F
Sbjct: 436 YSNSVLNPIIYTMYNGDFRRCF 457
>U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform b protein.
Length = 592
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
YSNS +NPI+Y + +F++ F
Sbjct: 543 YSNSVLNPIIYTMYNGDFRRCF 564
>U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform a protein.
Length = 564
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
YSNS +NPI+Y + +F++ F
Sbjct: 515 YSNSVLNPIIYTMYNGDFRRCF 536
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKS 701
Y NS +NPI+Y+F FK+S
Sbjct: 384 YCNSMLNPIIYSFTVKEFKRS 404
>U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine receptor
protein 1, isoformd protein.
Length = 212
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y+NS+ NP++Y+ + +F+++F K
Sbjct: 122 YANSSANPLIYSIFNRDFRRAFKK 145
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y+NS+ NP++Y+ + +F+++F K
Sbjct: 370 YANSSANPLIYSIFNRDFRRAFKK 393
>U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor
protein 1, isoformb protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y+NS+ NP++Y+ + +F+++F K
Sbjct: 312 YANSSANPLIYSIFNRDFRRAFKK 335
>U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor
protein 1, isoformc protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLK 692
Y+NS+ NP++Y+ + +F+++F K
Sbjct: 312 YANSSANPLIYSIFNRDFRRAFKK 335
>U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide
receptor family protein1 protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = -1
Query: 760 SNSAMNPILYAFLSDNFKKSFLK 692
SN+ +NP+LYA+L+ +F++ +K
Sbjct: 333 SNNVLNPVLYAWLNPSFRQLVIK 355
>U23183-3|AAA64340.3| 496|Caenorhabditis elegans Hypothetical
protein K01A12.3 protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 757 NSAMNPILYAFLSDNFKKSFLKACTCAA 674
N NP +YA+ +D + ++ + TCAA
Sbjct: 329 NHTCNPFIYAYFNDRMRLTYKEILTCAA 356
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKS 701
Y NS +NPI+Y+F FK+S
Sbjct: 384 YCNSMLNPIIYSFTVKEFKRS 404
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NS MNPI+Y + F+++F
Sbjct: 798 YMNSFMNPIIYTIFNTEFRRAF 819
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NS MNPI+Y + F+++F
Sbjct: 663 YMNSFMNPIIYTIFNTEFRRAF 684
>AF000191-4|AAB52881.2| 362|Caenorhabditis elegans Hypothetical
protein T23C6.5 protein.
Length = 362
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKS 701
+ N+A++P LYAFLS F++S
Sbjct: 302 FFNAAVDPFLYAFLSTRFRQS 322
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NS MNPI+Y + F+++F
Sbjct: 663 YMNSFMNPIIYTIFNTEFRRAF 684
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSF 698
Y NS MNPI+Y + F+++F
Sbjct: 798 YMNSFMNPIIYTIFNTEFRRAF 819
>U88309-1|AAB42331.3| 395|Caenorhabditis elegans Hypothetical
protein T23B3.4 protein.
Length = 395
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKAC 686
Y +S NPI Y F++ +F+ S L C
Sbjct: 328 YISSLANPITYCFMNKSFRSSVLAYC 353
>U41038-2|AAX88827.1| 635|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform b
protein.
Length = 635
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
Y +S +NPI+Y + F+++F++ C
Sbjct: 369 YVSSTINPIIYTVFNKRFRQAFVRILRC 396
>U41038-1|AAK29709.2| 683|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform a
protein.
Length = 683
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
Y +S +NPI+Y + F+++F++ C
Sbjct: 417 YVSSTINPIIYTVFNKRFRQAFVRILRC 444
>AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin
receptor protein.
Length = 635
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
Y +S +NPI+Y + F+++F++ C
Sbjct: 369 YVSSTINPIIYTVFNKRFRQAFVRILRC 396
>AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin
receptor protein.
Length = 683
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
Y +S +NPI+Y + F+++F++ C
Sbjct: 417 YVSSTINPIIYTVFNKRFRQAFVRILRC 444
>Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
+ +SA+NPILYA LS F+ + C
Sbjct: 348 FISSAINPILYACLSKRFRNALSDVIHC 375
>Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFKKSFLKACTC 680
+ +SA+NPILYA LS F+ + C
Sbjct: 348 FISSAINPILYACLSKRFRNALSDVIHC 375
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 YTYNVKDANNDSPKDGAQVFQGCRPISIRLLQSID--TKIVSSSTSAHGSRWRRE 416
Y Y V +A+ +P DGA I L Q++D K+ S S + H S+W ++
Sbjct: 472 YEYIVYEASQSAPVDGASYVGAPHVIIKGLKQNVDYTFKVRSRSVNGH-SQWSKD 525
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 YTYNVKDANNDSPKDGAQVFQGCRPISIRLLQSID--TKIVSSSTSAHGSRWRRE 416
Y Y V +A+ +P DGA I L Q++D K+ S S + H S+W ++
Sbjct: 472 YEYIVYEASQSAPVDGASYVGAPHVIIKGLKQNVDYTFKVRSRSVNGH-SQWSKD 525
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 YTYNVKDANNDSPKDGAQVFQGCRPISIRLLQSID--TKIVSSSTSAHGSRWRRE 416
Y Y V +A+ +P DGA I L Q++D K+ S S + H S+W ++
Sbjct: 472 YEYIVYEASQSAPVDGASYVGAPHVIIKGLKQNVDYTFKVRSRSVNGH-SQWSKD 525
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 YTYNVKDANNDSPKDGAQVFQGCRPISIRLLQSID--TKIVSSSTSAHGSRWRRE 416
Y Y V +A+ +P DGA I L Q++D K+ S S + H S+W ++
Sbjct: 472 YEYIVYEASQSAPVDGASYVGAPHVIIKGLKQNVDYTFKVRSRSVNGH-SQWSKD 525
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 258 YTYNVKDANNDSPKDGAQVFQGCRPISIRLLQSID--TKIVSSSTSAHGSRWRRE 416
Y Y V +A+ +P DGA I L Q++D K+ S S + H S+W ++
Sbjct: 472 YEYIVYEASQSAPVDGASYVGAPHVIIKGLKQNVDYTFKVRSRSVNGH-SQWSKD 525
>Z81579-6|CAB04652.3| 347|Caenorhabditis elegans Hypothetical
protein R13H4.7 protein.
Length = 347
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 760 SNSAMNPILYAFLSDNFKKSFLKAC 686
+NS +NP+LY F S +K L C
Sbjct: 270 TNSFVNPLLYLFFSSVIRKGVLSNC 294
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 647 VQSGVHVLSGGTSARFQKTLLEIIRQKR 730
+Q G+H+LSGG + QK L+E ++ K+
Sbjct: 3920 LQLGIHLLSGG-NVEIQKMLIEYLQLKK 3946
>U42832-6|AAP40542.2| 342|Caenorhabditis elegans Hypothetical
protein F01E11.5b protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFK 707
YSNSAMNPI+Y + +++
Sbjct: 305 YSNSAMNPIIYTVFNRDYQ 323
>U42832-5|ABA03119.1| 468|Caenorhabditis elegans Hypothetical
protein F01E11.5c protein.
Length = 468
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFK 707
YSNSAMNPI+Y + +++
Sbjct: 431 YSNSAMNPIIYTVFNRDYQ 449
>U42832-4|AAA83574.4| 462|Caenorhabditis elegans Hypothetical
protein F01E11.5a protein.
Length = 462
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 763 YSNSAMNPILYAFLSDNFK 707
YSNSAMNPI+Y + +++
Sbjct: 425 YSNSAMNPIIYTVFNRDYQ 443
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 647 VQSGVHVLSGGTSARFQKTLLEIIRQKR 730
+Q G+H+LSGG + QK L+E ++ K+
Sbjct: 3917 LQLGIHLLSGG-NVEIQKMLIEYLQLKK 3943
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,586,235
Number of Sequences: 27780
Number of extensions: 227906
Number of successful extensions: 641
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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