Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C04
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    28   0.33 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   4.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.4  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           23   7.2  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   7.2  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           23   9.5  
EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           23   9.5  
EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.           23   9.5  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = -3

Query: 445 KDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYE 266
           K +S +  ++  +E K     + E    KEA  TV RT+Q+ + K+    + M      E
Sbjct: 358 KTDSTIDTYRADIESK-----KQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRN--ASE 410

Query: 265 MPPRLQKQMKQMEEHLKK 212
              R+QK  +Q+E+ L++
Sbjct: 411 RVTRIQKDARQIEQDLQE 428


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 316 KKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKY-PEHYPLNQHES 176
           +K   NW    +   Y+      +Q+  +EEH+K Y P+   L  H S
Sbjct: 650 RKPDVNWGSTTQAQTYKNALLSVQQLNNVEEHVKNYRPQILVLCGHPS 697


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 393 TGTRRLRRPGVRKQGIRW 340
           TGT R +R  VR  G RW
Sbjct: 222 TGTARRQRTAVRLAGTRW 239


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
 Frame = -3

Query: 577  RARDFTVANNKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKD-ESPLQKFKLYLEH 401
            R R  T   N+ V  E    +V   +   D     ++++ +   K+ ES +QK K   + 
Sbjct: 855  RKRQLTNCRNEVVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEK-EAQE 913

Query: 400  KGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPR-LQKQMKQMEE 224
            K   D +  + W+ +      +  +  EK         ++  Y +M  + L K++++  +
Sbjct: 914  KLEEDGKRMEKWATKENMLRQKIDECTEKIAGLGALPNVDASYQKMSLKSLFKELEKANQ 973

Query: 223  HLKKY 209
            HLKKY
Sbjct: 974  HLKKY 978


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -3

Query: 463 EIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAE 317
           E+Q  T+++SPLQ  +  ++       E + A +   RD  +   +E +
Sbjct: 420 ELQNATEEQSPLQLLRAIVKRYEEMYVEQQSAQNNAIRDWDMYQQKETQ 468


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 259 PRLQKQMKQMEEHLKKYPEHYP 194
           P+LQ+Q +Q ++H    P++ P
Sbjct: 91  PQLQQQQQQHQQHGPSGPQYQP 112


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 463 EIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARD 347
           E+Q  T+++SPLQ  +  ++       E + A +   RD
Sbjct: 420 ELQNATEEQSPLQLLRAIVKRYEEMYVEQQSAQNNAIRD 458


>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -3

Query: 463 EIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAE 317
           E+Q  T+++SPLQ  +  ++       E + A +   RD  +   +E +
Sbjct: 420 ELQHATEEQSPLQLLRAIVKRYEEMYVEQQSAQNNAIRDWDMYQQKETQ 468


>EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 463 EIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARD 347
           E+Q  T+++SPLQ  +  ++       E + A +   RD
Sbjct: 420 ELQHATEEQSPLQPLRAIVKRYEEMYVEQQSAQNNAIRD 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,738
Number of Sequences: 2352
Number of extensions: 12655
Number of successful extensions: 187
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)