Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_C02
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.42 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.42 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   6.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.0  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   9.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 417 MAMFIAA*ACYR*YSRTMYHKMLIEKRHLIVFYL-VFITVA-ELSLIIN 277
           +   IAA   Y  Y R  Y++ L    HL++ YL  F+ VA    +I+N
Sbjct: 50  LVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILN 98


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 417 MAMFIAA*ACYR*YSRTMYHKMLIEKRHLIVFYL-VFITVA-ELSLIIN 277
           +   IAA   Y  Y R  Y++ L    HL++ YL  F+ VA    +I+N
Sbjct: 50  LVSIIAAGTAYSIYVRHTYYRRLYTITHLVLDYLDEFLIVALAFQVILN 98


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 551 FECISTKHSILDEFIGGPL 607
           F C +TK+   D+ IG P+
Sbjct: 309 FYCAATKNPNFDKMIGNPI 327


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 63  LT*VXYEKRNKXKCFFLILIKHNIFAMIIIARRNTSITLILFL 191
           LT V +EKR+    F LI I+   F        N  +  +LFL
Sbjct: 52  LTIVFFEKRSALSPFELIQIRTINFVATFRTIANIILMAVLFL 94


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 473 TVSFFGSGILAYFTRTS-QSILFV*VTFE 556
           T  FFG+ IL+Y  + S + I+    TF+
Sbjct: 373 TFGFFGTHILSYINKASFKKIVNTVATFD 401


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 312 KPDRILLDVSSQL 350
           KP RIL DVSS++
Sbjct: 313 KPIRILFDVSSEI 325


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 616 WIYCISYSGR 645
           W+YC  YS R
Sbjct: 193 WVYCTRYSDR 202


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 594 INSSKMECFVEIHSKVTYTNKIDCDVLVKY 505
           +N S +   ++ HS V   +  DC    KY
Sbjct: 269 VNKSMLNSHMKSHSNVYRYSCRDCSYATKY 298


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 594 INSSKMECFVEIHSKVTYTNKIDCDVLVKY 505
           +N S +   ++ HS V   +  DC    KY
Sbjct: 27  VNKSMLNSHMKSHSNVYRYSCRDCSYATKY 56


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 232 LCLSYITCIFA 264
           LCL Y TC+++
Sbjct: 7   LCLVYATCVYS 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,280
Number of Sequences: 336
Number of extensions: 2540
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)