Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_B21
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 1.9
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 28 5.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 28 7.7
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 28 7.7
AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical ... 28 7.7
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 28 7.7
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 28 7.7
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 615 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 487
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 678 KPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDED 502
KP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 281 KPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADST 340
Query: 501 KP 496
P
Sbjct: 341 TP 342
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 708 ATVAEISKEXKPSA--TDAEGSADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADA 535
AT S E +A TD+ SAD+ A + + A + E+ A + +T A
Sbjct: 318 ATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSEHAAESTEAPATDIAATETTPAPSV 377
Query: 534 P-KLADNPVDEDKPADI 487
P +AD D P+ I
Sbjct: 378 PAPVADAAAGYDSPSSI 394
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 27.9 bits (59), Expect = 7.7
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -2
Query: 347 PQKVRNHLTNPNLKKTNLR*TAEALSGGRVLTVFDTRPLLAANTLTRAPL---PTREIN- 180
P V N+L N T+ GRV+T D+ P+ A T+ P+ P N
Sbjct: 342 PFNVDNNLNINNQIMAISNETSMVARHGRVITYEDSAPV--AKIPTQQPIHNYPNSTQND 399
Query: 179 CSIYV*NYPM*VRVAFSTPRWITVYFLD 96
C +Y N +RV RW+ V+ D
Sbjct: 400 CDMYKLNATETIRVNNDIERWVQVHSFD 427
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 717 EVQATVAEISKEXKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 550
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 80 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 138
Query: 549 EAADAPKLADNPVDED 502
EA +AP++A +DE+
Sbjct: 139 EAPEAPEIAAE-IDEE 153
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 717 EVQATVAEISKEXKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 550
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 549 EAADAPKLADNPVDED 502
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>AL021572-2|CAA16518.1| 415|Caenorhabditis elegans Hypothetical
protein W06H3.2 protein.
Length = 415
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 651 SADSAAIIPNMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVD 508
+A++ A P + +A S AA + PEA DAPK A+ P +
Sbjct: 356 TANAEAEEPEKKTFVTMAAACASKAAKEQDGVAPEAQDAPKEAEAPAE 403
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 717 EVQATVAEISKEXKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 550
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 549 EAADAPKLADNPVDED 502
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 717 EVQATVAEISKEXKPSATDAEGSADSAAIIPNMVKKIDLAPTVES----DAAAVPEIKTP 550
EVQ V + S SA +E S SA +P + D +S DA+A + P
Sbjct: 117 EVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDVPDSLGASDASAQEIPEAP 175
Query: 549 EAADAPKLADNPVDED 502
EA +AP++A +DE+
Sbjct: 176 EAPEAPEIAAE-IDEE 190
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 618 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 487
V +DL T E+ +PEI TP D+ + +N V+ + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,472,558
Number of Sequences: 27780
Number of extensions: 186524
Number of successful extensions: 526
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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