Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_B17
         (353 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30 pro...    75   8e-14
CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.                75   8e-14
BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24 p...    75   8e-14
BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24 p...    75   8e-14
AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24 p...    75   8e-14
AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for p...    73   3e-13

>M94314-1|AAC28251.1|  157|Homo sapiens ribosomal protein L30
           protein.
          Length = 157

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = -2

Query: 337 LMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 158
           L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DIMAKRN KPEV
Sbjct: 41  LSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>CR456729-1|CAG33010.1|  157|Homo sapiens RPL24 protein.
          Length = 157

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = -2

Query: 337 LMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 158
           L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DIMAKRN KPEV
Sbjct: 41  LSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>BC070193-1|AAH70193.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = -2

Query: 337 LMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 158
           L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DIMAKRN KPEV
Sbjct: 41  LSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>BC000690-1|AAH00690.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = -2

Query: 337 LMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 158
           L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DIMAKRN KPEV
Sbjct: 41  LSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>AB061828-1|BAB79466.1|  157|Homo sapiens ribosomal protein L24
           protein.
          Length = 157

 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 36/60 (60%), Positives = 40/60 (66%)
 Frame = -2

Query: 337 LMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMKPEV 158
           L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DIMAKRN KPEV
Sbjct: 41  LSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100


>AL158815-1|CAI19461.1|  128|Homo sapiens se, the PEX6 gene for
           peroxisomal biogenesis factorA, member 8) protein.
          Length = 128

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 35/63 (55%), Positives = 41/63 (65%)
 Frame = -2

Query: 346 ISHLMRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXAIVGASLSDIMAKRNMK 167
           ++ L +RNPR++ WTVLYRRK KKGQ EE              AI GASL+DI AKRN K
Sbjct: 38  LAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADITAKRNQK 97

Query: 166 PEV 158
           PEV
Sbjct: 98  PEV 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,555,734
Number of Sequences: 237096
Number of extensions: 509745
Number of successful extensions: 875
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)