Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_B09
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    50   2e-06
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    48   7e-06
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.      28   8.5  
AF070070-1|AAC70065.1|  933|Caenorhabditis elegans MutS homolog ...    28   8.5  

>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESADAEQK 670
           YKDSTLIMQL RDNLTLWTSD+  + +  +  Q+
Sbjct: 212 YKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQE 245


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESADAEQK 670
           YKDSTLIMQL RDNLTLWTSD+  + +  +  Q+
Sbjct: 212 YKDSTLIMQLLRDNLTLWTSDVGAEDQEQEGNQE 245


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 22/30 (73%), Positives = 23/30 (76%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESAD 682
           YKDSTLIMQL RDNLTLWTSD   D   A+
Sbjct: 213 YKDSTLIMQLLRDNLTLWTSDAATDDTDAN 242


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical
           protein F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 38  WSAINASCITLRLIASVFPWLNSQISAIXRPLTXAPPVXCVRAH 169
           WS + A C  LR++ +V P ++S++      L     V C R H
Sbjct: 113 WSLVEAECEELRVLQTVPPLVSSELIVTGNTLAKC-IVMCFRLH 155


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical
           protein F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 38  WSAINASCITLRLIASVFPWLNSQISAIXRPLTXAPPVXCVRAH 169
           WS + A C  LR++ +V P ++S++      L     V C R H
Sbjct: 113 WSLVEAECEELRVLQTVPPLVSSELIVTGNTLAKC-IVMCFRLH 155


>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
           protein F09E8.3 protein.
          Length = 1369

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 640
           Y+D T       D +  W S +    +   AE++E  +D +D D
Sbjct: 139 YEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182


>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
          Length = 1369

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 640
           Y+D T       D +  W S +    +   AE++E  +D +D D
Sbjct: 139 YEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182


>AF070070-1|AAC70065.1|  933|Caenorhabditis elegans MutS homolog
           protein.
          Length = 933

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 771 YKDSTLIMQLXRDNLTLWTSDMQGDGESADAEQKEPAQDGEDQD 640
           Y+D T       D +  W S +    +   AE++E  +D +D D
Sbjct: 139 YEDGTTEEGTSEDTVPTWDSSLAYSTDETTAEKEEKEEDEDDDD 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,343,432
Number of Sequences: 27780
Number of extensions: 259986
Number of successful extensions: 815
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)