Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_B05
         (324 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical ...    27   2.3  
AL132862-33|CAB70222.3|  308|Caenorhabditis elegans Hypothetical...    27   3.1  
Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CT...    27   4.1  
Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical pr...    26   5.4  
U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical pr...    25   9.5  

>AC024792-6|AAF60686.2|  901|Caenorhabditis elegans Hypothetical
           protein Y48G1A.1 protein.
          Length = 901

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 197 FTFNFHYTIFYSKDKVIIKSLLQNRLKCTFSTYEYNRPAEFI 322
           FT  F Y +FYS ++ +++ LLQ +   + S      P E +
Sbjct: 558 FTLPFLYELFYSFEEKVLEGLLQRKYLISNSISSVLPPKELL 599


>AL132862-33|CAB70222.3|  308|Caenorhabditis elegans Hypothetical
           protein Y73F8A.3 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 122 IFLTYLFHVSILMIKFFF*LVL*SIFTFNFHYTIFYS 232
           I+   + H S L  K+F+  +L S  TF F+Y  +Y+
Sbjct: 111 IYRYLVIHNSSLTKKYFYIYMLGSFITFAFYYFYWYA 147


>Z81094-5|CAB03149.2|  675|Caenorhabditis elegans Hypothetical
           protein F58G11.5 protein.
          Length = 675

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 206 NFHYTIFYSKDKVIIKSLLQNRLKCTFSTYEYNRPA 313
           N  Y + + ++K  IK   + + KC+   +  NRP+
Sbjct: 436 NLKYPLEFLEEKARIKKTFEEKQKCSVEEFITNRPS 471


>AF536544-1|AAN77185.1|  675|Caenorhabditis elegans SR-related CTD
           associated factor 6 protein.
          Length = 675

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 206 NFHYTIFYSKDKVIIKSLLQNRLKCTFSTYEYNRPA 313
           N  Y + + ++K  IK   + + KC+   +  NRP+
Sbjct: 436 NLKYPLEFLEEKARIKKTFEEKQKCSVEEFITNRPS 471


>Z78544-4|CAB01762.3|  374|Caenorhabditis elegans Hypothetical
           protein K04G11.5 protein.
          Length = 374

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +1

Query: 118 KNFFNLFVSCEYFND*IFFLTCAVINFHI*FSLYYIL 228
           +N+F+L + C +    I FL   ++++ I   +YY++
Sbjct: 67  RNWFHLIIECNWRTICILFLLGFIVSWTIFAVIYYVI 103


>Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical
           protein C53D6.3 protein.
          Length = 445

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 191 SIFTFNFHYTIFYSKDKVIIKSLLQNRL 274
           S F FN  Y  +Y   K IIK  L NR+
Sbjct: 416 SFFVFNIIYWFYYIHRKEIIKQNLINRV 443


>U70844-4|AAB09095.2| 1105|Caenorhabditis elegans Hypothetical
           protein ZK154.5 protein.
          Length = 1105

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 1   ISXYNIKHLIGSEDH*KH*PYSNEVIKFGSVLLA 102
           I+ Y I   + SED  K  P   EV +FG V +A
Sbjct: 751 INEYKILDYMKSEDFKKCLPLEKEVTEFGKVFMA 784


>Z68335-3|CAA92730.2|  540|Caenorhabditis elegans Hypothetical
           protein C29F4.2 protein.
          Length = 540

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 200 TFNFHYTIFYSKDKVIIKSLLQ 265
           T+N+HY +  S+ KVI+K + +
Sbjct: 2   TYNYHYDLATSQRKVILKLIFK 23


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,359,710
Number of Sequences: 27780
Number of extensions: 108570
Number of successful extensions: 226
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)