Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_A21
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.5
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 4.6
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 4.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.6
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 6.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 6.0
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.0
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 416 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 447
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 484 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 515
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 346 NEKYQIIAFFKFTKMVKDRNQTYYYCFFTIKA 441
+E +II+ +KF MV DR + FT+ A
Sbjct: 484 DESDEIISDWKFAAMVVDRLCLIVFTLFTVLA 515
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 478 RQQLSNATGIVFHFHD 525
R +L+N G+VFH HD
Sbjct: 231 RPELTNRKGVVFH-HD 245
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 379 FTKMVKDRNQTYYYCFFT 432
F ++ DR YY FFT
Sbjct: 463 FAQLFADRGMKVYYYFFT 480
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 379 FTKMVKDRNQTYYYCFFT 432
F ++ DR YY FFT
Sbjct: 463 FAQLFADRGMKVYYYFFT 480
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 100 NQYVVCFFTVFTDXLVNGI 156
+Q ++C VF L+NG+
Sbjct: 767 SQLIICSGLVFVQILINGV 785
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 478 RQQLSNATGIVFHFHD 525
R +L+N G+VFH D
Sbjct: 110 RFELTNRKGVVFHHDD 125
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 257 SQPTIFENKITHQNHSINCCHYSG 328
+QP IF+ I + N +I+ Y+G
Sbjct: 237 AQPYIFQEVIDYGNEAISKREYNG 260
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 156 NSIYEXISKNSKKANNVLIIDNKINEQLFVKK 61
N+ ISK K NN I + +N L V +
Sbjct: 512 NNTIVDISKLVNKRNNAKIYTSSVNSNLTVNQ 543
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,975
Number of Sequences: 438
Number of extensions: 3180
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -