Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_A15
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82130-1|AAC52083.1| 390|Homo sapiens tumor susceptibility prot... 31 2.1
BC002487-1|AAH02487.1| 390|Homo sapiens tumor susceptibility ge... 31 2.1
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 30 3.6
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 30 3.6
BC112138-1|AAI12139.1| 435|Homo sapiens CADM2 protein protein. 30 3.6
BC112136-1|AAI12137.1| 435|Homo sapiens CADM2 protein protein. 30 3.6
AF538973-1|AAN16368.1| 437|Homo sapiens nectin-like protein 3 p... 30 3.6
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 29 4.8
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 29 4.8
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 29 4.8
AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein pr... 29 4.8
AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus prot... 29 4.8
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 29 4.8
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 29 4.8
U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein. 29 8.4
BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific pept... 29 8.4
BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific pept... 29 8.4
AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific prot... 29 8.4
AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific prot... 29 8.4
AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein. 29 8.4
AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein. 29 8.4
>U82130-1|AAC52083.1| 390|Homo sapiens tumor susceptibility protein
protein.
Length = 390
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 297 VVINDPDPFFAQPTVGNGYEPID-----NRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 133
VV D P F++P + Y P N Y+ P +P +GY P +G P
Sbjct: 133 VVFGDEPPVFSRP-ISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYP 191
Query: 132 QGRPY 118
G PY
Sbjct: 192 PGGPY 196
>BC002487-1|AAH02487.1| 390|Homo sapiens tumor susceptibility gene
101 protein.
Length = 390
Score = 30.7 bits (66), Expect = 2.1
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = -3
Query: 297 VVINDPDPFFAQPTVGNGYEPID-----NRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 133
VV D P F++P + Y P N Y+ P +P +GY P +G P
Sbjct: 133 VVFGDEPPVFSRP-ISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYP 191
Query: 132 QGRPY 118
G PY
Sbjct: 192 PGGPY 196
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = -3
Query: 261 PTVGNGYEPIDNRPYIVNP----PKDYNPNGNGYEPIDNGAYYVDRPQGRP 121
PT G+ P + PYI +P Y+P YEP G Y P P
Sbjct: 1567 PTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Frame = -3
Query: 261 PTVGNGYEPIDNRPYIVNP----PKDYNPNGNGYEPIDNGAYYVDRPQGRP 121
PT G+ P + PYI +P Y+P YEP G Y P P
Sbjct: 1567 PTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSP 1617
>BC112138-1|AAI12139.1| 435|Homo sapiens CADM2 protein protein.
Length = 435
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 209 ILPKTTTLMETATNLSTTVHITWTXPKADLTSSRPLDPGARGGKERRDEKM 57
+LP T T ++TTV IT T P T+S DP A G+ D +
Sbjct: 320 LLPTTIIPSLTTATVTTTVAIT-TSPTTSATTSSIRDPNALAGQNGPDHAL 369
>BC112136-1|AAI12137.1| 435|Homo sapiens CADM2 protein protein.
Length = 435
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 209 ILPKTTTLMETATNLSTTVHITWTXPKADLTSSRPLDPGARGGKERRDEKM 57
+LP T T ++TTV IT T P T+S DP A G+ D +
Sbjct: 320 LLPTTIIPSLTTATVTTTVAIT-TSPTTSATTSSIRDPNALAGQNGPDHAL 369
>AF538973-1|AAN16368.1| 437|Homo sapiens nectin-like protein 3
protein.
Length = 437
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 209 ILPKTTTLMETATNLSTTVHITWTXPKADLTSSRPLDPGARGGKERRDEKM 57
+LP T T ++TTV IT T P T+S DP A G+ D +
Sbjct: 322 LLPTTIIPSLTTATVTTTVAIT-TSPTTSATTSSIRDPNALAGQNGPDHAL 371
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 368
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 368
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 368
>AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein
protein.
Length = 266
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 31 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 65
>AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus
protein.
Length = 625
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -1
Query: 164 STTVHITWTXPKADLTS--SRPLDPGARGGKERRDEKMKNERMDEQE 30
STT+ TWT P++ LT+ SR +P R E+RD +++ ++ +E
Sbjct: 255 STTLPSTWTAPQSRLTARPSRSPEPQIR-ESEQRDPQLRRKQQRWKE 300
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 368
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 192 NPNGNGYEPIDNGAYYVDRPQGRPYFKPTPXPXXA 88
N NGNGY G V P G P +PT P A
Sbjct: 266 NNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPA 300
>U20657-1|AAB72237.1| 963|Homo sapiens ubiquitin protease protein.
Length = 963
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 634 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 671
>BC125131-1|AAI25132.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 634 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 671
>BC125130-1|AAI25131.1| 963|Homo sapiens ubiquitin specific
peptidase 4 (proto-oncogene) protein.
Length = 963
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 634 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 671
>AK223292-1|BAD97012.1| 963|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform a variant protein.
Length = 963
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 634 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 671
>AK222725-1|BAD96445.1| 916|Homo sapiens ubiquitin specific
protease, proto-oncogene isoform b variant protein.
Length = 916
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 587 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 624
>AF017306-1|AAC27356.1| 916|Homo sapiens UnpES protein.
Length = 916
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 587 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 624
>AF017305-1|AAC27355.1| 963|Homo sapiens UnpEL protein.
Length = 963
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 134 PKADLTSSRPLDPGARGGKERRDEKMKNERMDEQEIAK 21
P D S PL+PGA G E E M+ QE K
Sbjct: 634 PLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGK 671
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,376,621
Number of Sequences: 237096
Number of extensions: 1291959
Number of successful extensions: 4006
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4001
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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