Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_A13
         (574 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0359 + 2829325-2832076,2832223-2832593,2833335-2833695,283...    28   4.6  

>01_01_0359 +
           2829325-2832076,2832223-2832593,2833335-2833695,
           2833799-2833868,2834021-2834108,2834325-2834580,
           2834758-2834883,2835217-2835425
          Length = 1410

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = -1

Query: 376 SLENSSFVNSTAFPFSITNKLRSKSTNVHYMGNPDLMPIASYESTILVRILHQISTKINE 197
           +L  +SF  S AFP ++T+ +  K  ++ Y     ++P+    +   +++L   +  I  
Sbjct: 124 NLSYNSF--SGAFPVNLTSCISLKILDLDYNQLGGIIPVELGNTLTQLQMLLLTNNSIIG 181

Query: 196 LYEPTFANLWNRQDIW-GYAAREVLQKPC 113
              P+ ANL   QD++  Y   E L  PC
Sbjct: 182 PIPPSLANLSLLQDLYLDYNHLEGLIPPC 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,330,431
Number of Sequences: 37544
Number of extensions: 271620
Number of successful extensions: 505
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)