Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_A09
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.                29   4.6  
BC035913-1|AAH35913.1|  737|Homo sapiens PCNT protein protein.         29   4.6  
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.        29   4.6  
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.             29   4.6  
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250...    28   8.0  
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ...    28   8.0  
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc...    28   8.0  

>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
          Length = 3321

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = +1

Query: 163 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 279
           L++    YQ+DL+LL+Q+ QG+R      S+ V L+   +  KP+
Sbjct: 527 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 571


>BC035913-1|AAH35913.1|  737|Homo sapiens PCNT protein protein.
          Length = 737

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = +1

Query: 163 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 279
           L++    YQ+DL+LL+Q+ QG+R      S+ V L+   +  KP+
Sbjct: 514 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 558


>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
          Length = 3336

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = +1

Query: 163 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 279
           L++    YQ+DL+LL+Q+ QG+R      S+ V L+   +  KP+
Sbjct: 527 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 571


>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
          Length = 3284

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = +1

Query: 163 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 279
           L++    YQ+DL+LL+Q+ QG+R      S+ V L+   +  KP+
Sbjct: 554 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 598


>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
            protein.
          Length = 2442

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 124  TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 258
            T   + +  R  +LQE     QQ+LS LRQ  Q ++    EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102


>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
            protein 1 protein.
          Length = 2442

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 124  TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 258
            T   + +  R  +LQE     QQ+LS LRQ  Q ++    EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102


>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
            protein protein.
          Length = 2442

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 124  TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 258
            T   + +  R  +LQE     QQ+LS LRQ  Q ++    EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,673,421
Number of Sequences: 237096
Number of extensions: 813325
Number of successful extensions: 1813
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)