Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_A09
         (365 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58735-4|AAC48144.1|  479|Caenorhabditis elegans Hypothetical pr...    27   3.1  
AF025461-4|AAB70993.1|  270|Caenorhabditis elegans Hypothetical ...    27   4.1  
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      27   5.4  
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    26   7.2  
Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AC006720-9|AAF60443.2|  480|Caenorhabditis elegans Hypothetical ...    26   9.5  

>U58735-4|AAC48144.1|  479|Caenorhabditis elegans Hypothetical
           protein F20B4.3 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 142 RSSRNCMLQEHPDQYQQDLSLLRQKFQGSR-SIPVELAVQAIFSKPQP 282
           R++ N M++EH  Q +    L RQ+F   + SIP  LA   I     P
Sbjct: 116 RAAHNHMMEEHRRQSEASPILERQRFTPQQTSIPPGLAEAPILQSASP 163


>AF025461-4|AAB70993.1|  270|Caenorhabditis elegans Hypothetical
           protein M01D1.7 protein.
          Length = 270

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 49  FQVYSLSSXLHSWVVRPHHHIGTLXTFYCLHRSSRNCMLQEHPDQYQQDLS 201
           F+ + LS  LH + V            +C  R  R C   E+PD +  D S
Sbjct: 48  FKGFELSVWLHPYAVELELFKNGEGATHCSFRDGRACEHNEYPDGFTFDAS 98


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 127 FYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQAIFSKPQPFIY-ACRP 303
           F  +  S  +CM  E+ +Q  + +  +R   Q      VEL V     +   +I  A  P
Sbjct: 75  FELVSNSKGSCMEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASP 134

Query: 304 YFKSI 318
           YFK++
Sbjct: 135 YFKAM 139


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 127 FYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQAIFSKPQPFIY-ACRP 303
           F  +  S  +CM  E+ +Q  + +  +R   Q      VEL V     +   +I  A  P
Sbjct: 75  FELVSNSKGSCMEYENQEQSSKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASP 134

Query: 304 YFKSI 318
           YFK++
Sbjct: 135 YFKAM 139


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 109 CGDE-AGRPKSEAXTTRSKPETKEIACVVV 23
           C DE +G PK  + TTR KP+ +E     V
Sbjct: 98  CVDELSGEPKLGSSTTRGKPKCEETPTTTV 127


>Z81113-8|CAO82064.1|  138|Caenorhabditis elegans Hypothetical
           protein T03F6.9 protein.
          Length = 138

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 206 NRLRSCWYWSGCSW 165
           N +RSC Y +GC+W
Sbjct: 70  NTIRSCSYETGCTW 83


>AC006720-9|AAF60443.2|  480|Caenorhabditis elegans Hypothetical
           protein Y17G9B.1 protein.
          Length = 480

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +1

Query: 61  SLSSXLHSWVVRPHHHIGTLXTFYCLHRSSRNCMLQEHPDQ 183
           SL   + S + R     G +   +C+   SR+ +L++HP++
Sbjct: 306 SLIPLISSHITRLSVFYGYIEQVFCIILLSRSALLRQHPEE 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,159,587
Number of Sequences: 27780
Number of extensions: 123571
Number of successful extensions: 395
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)