Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_A08
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109305-1|AAI09306.1|  840|Homo sapiens ATPase, H+ transporting...    34   0.41 
BC109304-1|AAI09305.1|  840|Homo sapiens ATPase, H+ transporting...    34   0.41 
AF245517-1|AAG11415.1|  840|Homo sapiens vacuolar proton pump 11...    34   0.41 

>BC109305-1|AAI09306.1|  840|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a4 protein.
          Length = 840

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 355 ISLFS--YRSRNKDISIKFSFAITYYICCYLYLKNVAISLLLMNWCCYEIKFSKYRCQKN 528
           +SLF+  Y  R  +I ++F   + + +C + YL    + +++  WCC+++  S++    +
Sbjct: 558 LSLFNHIYFRRTLNIILQFIPEMIFILCLFGYL----VFMIIFKWCCFDVHVSQH--APS 611

Query: 529 ILSELTNILIF 561
           IL    N+ +F
Sbjct: 612 ILIHFINMFLF 622


>BC109304-1|AAI09305.1|  840|Homo sapiens ATPase, H+ transporting,
           lysosomal V0 subunit a4 protein.
          Length = 840

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 355 ISLFS--YRSRNKDISIKFSFAITYYICCYLYLKNVAISLLLMNWCCYEIKFSKYRCQKN 528
           +SLF+  Y  R  +I ++F   + + +C + YL    + +++  WCC+++  S++    +
Sbjct: 558 LSLFNHIYFRRTLNIILQFIPEMIFILCLFGYL----VFMIIFKWCCFDVHVSQH--APS 611

Query: 529 ILSELTNILIF 561
           IL    N+ +F
Sbjct: 612 ILIHFINMFLF 622


>AF245517-1|AAG11415.1|  840|Homo sapiens vacuolar proton pump 116
           kDa accessory subunit protein.
          Length = 840

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +1

Query: 355 ISLFS--YRSRNKDISIKFSFAITYYICCYLYLKNVAISLLLMNWCCYEIKFSKYRCQKN 528
           +SLF+  Y  R  +I ++F   + + +C + YL    + +++  WCC+++  S++    +
Sbjct: 558 LSLFNHIYFRRTLNIILQFIPEMIFILCLFGYL----VFMIIFKWCCFDVHVSQH--APS 611

Query: 529 ILSELTNILIF 561
           IL    N+ +F
Sbjct: 612 ILIHFINMFLF 622


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,958,785
Number of Sequences: 237096
Number of extensions: 1305303
Number of successful extensions: 1508
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)