SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_A04
         (553 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC004534-2|AAC12957.1|  392|Homo sapiens WUGSC:H_DJ0545C24.1 pro...    33   0.88 
CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.          32   1.5  
AL833860-1|CAD38718.1|  657|Homo sapiens hypothetical protein pr...    32   1.5  
AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA seq...    32   1.5  
AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting wi...    32   1.5  
AB051455-1|BAB33338.1|  791|Homo sapiens KIAA1668 protein protein.     32   1.5  
AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated prot...    30   4.7  
AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated prot...    30   4.7  
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.     30   4.7  
AB126070-1|BAD20197.1|  278|Homo sapiens keratin associated prot...    30   6.2  
BC131599-1|AAI31600.1|  478|Homo sapiens RREB1 protein protein.        29   8.2  
AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or mix...    29   8.2  
AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.                 29   8.2  
AL589644-1|CAI14574.1| 1723|Homo sapiens ras responsive element ...    29   8.2  
AL355336-1|CAH73521.1| 1723|Homo sapiens ras responsive element ...    29   8.2  
AL139095-6|CAI16450.1| 1723|Homo sapiens ras responsive element ...    29   8.2  
AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.                 29   8.2  
AF072825-1|AAC25598.1|  526|Homo sapiens Raf responsive zinc fin...    29   8.2  
AB019351-1|BAD32778.1| 1687|Homo sapiens zinc-finger motif-enhan...    29   8.2  
AB019254-1|BAD32776.1| 1742|Homo sapiens zinc-finger motif-enhan...    29   8.2  

>AC004534-2|AAC12957.1|  392|Homo sapiens WUGSC:H_DJ0545C24.1
           protein.
          Length = 392

 Score = 32.7 bits (71), Expect = 0.88
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -1

Query: 277 HPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPPLTVDPDR 116
           +P  P P SSQCSS  E+ P V  E +P  P       +  P+  PP+ +  D+
Sbjct: 275 NPAAPGPASSQCSSAAEILPAVPMEPKPD-PFPQESPLDTFPE--PPMLLTSDQ 325


>CR456437-1|CAG30323.1|  863|Homo sapiens dJ1014D13.2 protein.
          Length = 863

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 259 PRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 137
           P SS  +     GP+  PEARPQ+PT      +    A+PP
Sbjct: 257 PSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPP 297


>AL833860-1|CAD38718.1|  657|Homo sapiens hypothetical protein
           protein.
          Length = 657

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 259 PRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 137
           P SS  +     GP+  PEARPQ+PT      +    A+PP
Sbjct: 51  PSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPP 91


>AL022311-1|CAI18864.1|  863|Homo sapiens protein ( Human DNA
           sequence from clone RP5-1014D13 on chromosome
           22q13.1-13.2.  ).
          Length = 863

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 259 PRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 137
           P SS  +     GP+  PEARPQ+PT      +    A+PP
Sbjct: 257 PSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPP 297


>AJ496196-1|CAD42713.1|  863|Homo sapiens molecule interacting with
           Rab13 protein.
          Length = 863

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 259 PRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 137
           P SS  +     GP+  PEARPQ+PT      +    A+PP
Sbjct: 257 PSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPP 297


>AB051455-1|BAB33338.1|  791|Homo sapiens KIAA1668 protein protein.
          Length = 791

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 259 PRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATPP 137
           P SS  +     GP+  PEARPQ+PT      +    A+PP
Sbjct: 185 PSSSAPAGAEADGPKASPEARPQIPTKPRVPGKLQELASPP 225


>AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36066 fis, clone TESTI2019257. ).
          Length = 192

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 253 SSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQATP 140
           +SQ +S      Q  PE+ PQ P+  +  ++ SP++TP
Sbjct: 18  TSQHASSNSTSQQPSPESTPQQPSPESTPQQPSPESTP 55


>AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated protein
           5-11 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
 Frame = +3

Query: 123 GSTVSGGVACGDASSTCAVC---VGNCGRASGTT--CGPTSPSEEHWEERGCGHSGWCE 284
           G +  G V+CG +   C  C    G CG   G+   CG    S+      GC     C+
Sbjct: 97  GGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQCSCCK 155


>AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
 Frame = +3

Query: 123 GSTVSGGVACGDASSTCAVC---VGNCGRASGTT--CGPTSPSEEHWEERGCGHSGWCE 284
           G +  G V+CG +   C  C    G CG   G+   CG    S+      GC     C+
Sbjct: 97  GGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQCSCCK 155


>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
          Length = 1460

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
 Frame = +3

Query: 198 RASGTTCGPTSPSEEHWEERGCGHS-GWCEVIFFLV-FLKRPLRLFLLM*RQPSSPWAPQ 371
           +A  T  G   P E+        H+   C + F     L    RL  L   QPS+P  PQ
Sbjct: 634 QAEATKAGGKEPEEKATPSPSPAHTCDQCAISFSSQDLLTSHRRLHFLPSLQPSAP--PQ 691

Query: 372 LRVLPALVVQERQALR*PWQPVP 440
           L  LP LV  ER  L     P+P
Sbjct: 692 LLDLPLLVFGERNPLVAATSPMP 714


>AB126070-1|BAD20197.1|  278|Homo sapiens keratin associated protein
           protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 6.2
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +3

Query: 123 GSTVSG-GVACGDASSTCAVCVGNCGRASGTTCGP 224
           GS+  G G  CG   S C  C   CG +  + C P
Sbjct: 11  GSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVP 45


>BC131599-1|AAI31600.1|  478|Homo sapiens RREB1 protein protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
           +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 205 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 250


>AY157990-1|AAN76325.1| 1778|Homo sapiens myeloid/lymphoid or
            mixed-lineage leukemia 5 protein.
          Length = 1778

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 268  CPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQV 167
            CPHP  S     G  GPQ       Q+P H AQV
Sbjct: 1732 CPHP-GSVALPHGVQGPQQASPVPGQIPIHRAQV 1764


>AY147037-1|AAN17675.1| 1858|Homo sapiens MLL5 protein.
          Length = 1858

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 268  CPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQV 167
            CPHP  S     G  GPQ       Q+P H AQV
Sbjct: 1812 CPHP-GSVALPHGVQGPQQASPVPGQIPIHRAQV 1844


>AL589644-1|CAI14574.1| 1723|Homo sapiens ras responsive element
            binding protein 1 protein.
          Length = 1723

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283  SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
            +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 1450 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 1495


>AL355336-1|CAH73521.1| 1723|Homo sapiens ras responsive element
            binding protein 1 protein.
          Length = 1723

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283  SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
            +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 1450 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 1495


>AL139095-6|CAI16450.1| 1723|Homo sapiens ras responsive element
            binding protein 1 protein.
          Length = 1723

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283  SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
            +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 1450 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 1495


>AF519459-1|AAM74947.1| 1858|Homo sapiens MLL5 protein.
          Length = 1858

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 268  CPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQV 167
            CPHP  S     G  GPQ       Q+P H AQV
Sbjct: 1812 CPHP-GSVALPHGVQGPQQASPVPGQIPIHRAQV 1844


>AF072825-1|AAC25598.1|  526|Homo sapiens Raf responsive zinc finger
           protein protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283 SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
           +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 253 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 298


>AB019351-1|BAD32778.1| 1687|Homo sapiens zinc-finger motif-enhancer
            binding-protein-1 beta protein.
          Length = 1687

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283  SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
            +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 1414 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 1459


>AB019254-1|BAD32776.1| 1742|Homo sapiens zinc-finger motif-enhancer
            binding-protein-1 protein.
          Length = 1742

 Score = 29.5 bits (63), Expect = 8.2
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 283  SHHPECPHPRSSQCSSDGEVGPQVVPEARPQLPTHTAQVEEASPQA 146
            +H  + P       +S  E GPQ  PE   + P   A+V E++P A
Sbjct: 1469 AHGRQEPKDEKGDGASTAEEGPQPAPEQEEKPPETPAEVVESAPGA 1514


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,615,550
Number of Sequences: 237096
Number of extensions: 1302558
Number of successful extensions: 4775
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4745
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -