Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P23
         (810 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0103 - 14623125-14623475,14623574-14623672,14624089-146247...    83   3e-16
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187...    30   2.5  
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368...    29   3.3  
09_04_0373 - 17037945-17040641                                         29   4.4  
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727     29   4.4  
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031...    28   7.6  

>09_04_0103 -
           14623125-14623475,14623574-14623672,14624089-14624724,
           14625803-14625964
          Length = 415

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 42/110 (38%), Positives = 61/110 (55%)
 Frame = +1

Query: 478 EGKNAQVVMLKGRHRCECQASKHELINNCLQCGRVVCRQEGSGPCLFCGSLVCTPEEQRE 657
           E     +V  +G+  C CQA +H L++NCL CG++VC QEG GPC FCG+LV        
Sbjct: 153 EAAKGSIVFKQGKP-CSCQARQHNLVSNCLSCGKIVCEQEGEGPCSFCGALVL------- 204

Query: 658 LNAKTKASAKLMESLMEKSRPKGWEDALVHXNRLLEYDRTSERRTRVXDD 807
           +   T A    +E  + ++      +A  +  RL++YDR S  RT+V DD
Sbjct: 205 MEGSTYAGLSDVEIPLSEAE----AEAEAYAKRLVDYDRNSAARTKVYDD 250


>03_02_0981 +
           12917195-12917572,12917661-12917818,12918732-12918765,
           12918942-12919074,12919167-12919221,12919281-12920064,
           12920440-12920769,12920788-12920895,12921259-12921678,
           12921775-12921847,12922291-12922376,12922873-12922992,
           12923086-12923156,12923350-12923449
          Length = 949

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +1

Query: 112 AFE*YLSSIKMEQWIRENLSTILDFEVPDDLIKYVSSIDNEVDLTEYMKTLIDFNNSEHK 291
           AFE  LSS      I   +  I+D EV DD+I       N+ ++   +K  I   +  HK
Sbjct: 472 AFEPSLSSSWDPLNIWRGIQEIMDEEVDDDVIVKAVDCSNQAEVDIELKQFIKGYSDGHK 531

Query: 292 NFFSEFIRLK 321
               E + LK
Sbjct: 532 GEDGELMMLK 541


>02_05_0280 +
           27435166-27435254,27436348-27436437,27436764-27436866,
           27437318-27437377,27437745-27439148,27439227-27439328,
           27439424-27439609,27439695-27439820,27439905-27440000,
           27440509-27440574
          Length = 773

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = -2

Query: 734 SSQPLGRLFSIRDSINLALA--LVLAFNSLCSSGVQTKLPQNRQGPEPSCLQTTRPHCKQ 561
           S  PL   F      NLA A  + L+ N+L     +   P N+ G    C+Q+ +P+  Q
Sbjct: 248 SENPLQIKFCQHPDSNLASATDVFLSLNNLPRIENEISCPPNKLG---YCIQSEKPYSFQ 304

Query: 560 LLISSCF 540
              SSCF
Sbjct: 305 SSFSSCF 311


>09_04_0373 - 17037945-17040641
          Length = 898

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 792 GATLTCPIIFQKSIXMHQSVLPALGSTL 709
           G+T TCP +F  S+ +  S  P  GSTL
Sbjct: 307 GSTCTCPPLFAASVTVAGSCTPGDGSTL 334


>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
          Length = 706

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/66 (22%), Positives = 29/66 (43%)
 Frame = -2

Query: 335 PLIGNFSLMNSEKKFLCSELLKSIKVFMYSVKSTSLSIDETYFIKSSGTSKSKIVDRFSL 156
           P IGN  ++N         +L  I  F Y+       +   +  K++    S + ++F++
Sbjct: 82  PFIGNVEVLNISLSRSTLRVLNGISTFCYNASGLMGGVHFRFNAKNTPFRFSDVYNKFTV 141

Query: 155 IHCSIL 138
           I C+ L
Sbjct: 142 IGCNTL 147


>05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183,
            27403297-27403449,27403544-27403644,27403945-27404041,
            27404542-27404651,27404775-27404878,27405129-27405308,
            27405398-27405741,27405841-27405905,27405981-27406450,
            27406939-27407793,27408045-27408116,27408475-27408575,
            27409069-27409170,27409295-27409456,27409665-27411230,
            27411384-27411602,27413924-27414198,27414291-27414596,
            27414727-27415012,27415085-27415087,27415162-27415416,
            27415537-27415803
          Length = 2236

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 562  CLQCGRVVCRQEGSGPCLFCGSLVCTPEEQRELNAKTKASAKLMES 699
            C+ CG   C QEGSG     G+ +    E    N   +A  +L+E+
Sbjct: 1763 CMDCGTPFCHQEGSGAGCPLGNKIPEFNELVHQNRWHEALDRLLET 1808


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,151,445
Number of Sequences: 37544
Number of extensions: 414436
Number of successful extensions: 1145
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)