Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P21
         (373 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    78   3e-15
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    78   3e-15
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P...    28   3.4  
AE014297-410|AAF51911.2|  263|Drosophila melanogaster CG31562-PA...    27   6.0  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 160 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 279
           N KFK+RCSRFLYTLV+ DKEKA+K+KQSLPPGLQVKEVK
Sbjct: 31  NTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEVK 70



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 69  MPREIKDIKDFLIKARRKDAKSVKIKKNP 155
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 78.2 bits (184), Expect = 3e-15
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 160 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 279
           N KFK+RCSRFLYTLV+ DKEKA+K+KQSLPPGLQVKEVK
Sbjct: 31  NTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQVKEVK 70



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 69  MPREIKDIKDFLIKARRKDAKSVKIKKNP 155
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29


>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
            protein.
          Length = 1833

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 84   KDIKDFLIKARRKDAKSVKIKKNPVECQVQGSM 182
            K+IKD   KA + D+K V+  K  VE +VQ S+
Sbjct: 1074 KEIKDLKTKASKSDSKQVQDLKKQVE-EVQASL 1105


>AE014297-410|AAF51911.2|  263|Drosophila melanogaster CG31562-PA
           protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -3

Query: 218 LSVMTRVYRNLEHRTLNLTFYRVLLYFDRFGVFPPRLN*KVF 93
           + VMTR+Y + EH     + Y      D + +F P+++ K+F
Sbjct: 43  VGVMTRIYVDFEHGDGKSSLYLYNRELDMYDIFLPKMS-KIF 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,541,101
Number of Sequences: 53049
Number of extensions: 207169
Number of successful extensions: 609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)