Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P21
         (373 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    74   3e-14
Z77658-7|CAB01154.1|  254|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AF125446-2|AAD12805.1|  379|Caenorhabditis elegans Hypothetical ...    27   5.7  
AF025458-2|AAB70978.1|  557|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z78537-2|CAB01720.2|  604|Caenorhabditis elegans Hypothetical pr...    26   9.9  
U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusi...    26   9.9  
U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusi...    26   9.9  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 74.1 bits (174), Expect = 3e-14
 Identities = 35/62 (56%), Positives = 45/62 (72%)
 Frame = +1

Query: 94  KTF*LRRGGKTPNRSK*RRTL*NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 273
           K F ++   K     K ++   N KFKVRC+ +LYTLV+ DK+KAEKLKQSLPPG+QVKE
Sbjct: 9   KDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQVKE 68

Query: 274 VK 279
           +K
Sbjct: 69  LK 70



 Score = 56.4 bits (130), Expect = 6e-09
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +3

Query: 69  MPREIKDIKDFLIKARRKDAKSVKIKKN 152
           MP+EIK+IKDFL+KARRKDAKSVKIKKN
Sbjct: 1   MPKEIKEIKDFLVKARRKDAKSVKIKKN 28


>Z77658-7|CAB01154.1|  254|Caenorhabditis elegans Hypothetical
           protein F14D7.8 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 212 VMTRVYRNLEHR---TLNLTFYRVLLYFDRFGVFPPRL 108
           V+  VY N E     + N+ ++ VLLYF  F VFP  L
Sbjct: 54  VLFGVYNNTERSLRWSANIVYFYVLLYFAIFLVFPVML 91


>AF125446-2|AAD12805.1|  379|Caenorhabditis elegans Hypothetical
           protein R05C11.2 protein.
          Length = 379

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 11/38 (28%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 63  FNMPR-EIKDIKDFLIKARRKDAKSVKIKKNPVECQVQ 173
           F++P  ++  I++FL+  + ++AK + I K  ++C V+
Sbjct: 225 FDVPASDVWSIEEFLVMEQWRNAKELTIIKRVIKCDVE 262


>AF025458-2|AAB70978.1|  557|Caenorhabditis elegans Hypothetical
           protein C01B12.5 protein.
          Length = 557

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 215 SVMTRVYRNLEHRTLNLTFYRVLLYFDRFGVFPP 114
           S+++ +YR L ++     F ++  +FD F VF P
Sbjct: 44  SILSVIYRILLNKAQREVFEQLCTFFDTFSVFIP 77


>Z78537-2|CAB01720.2|  604|Caenorhabditis elegans Hypothetical
           protein C09F12.2 protein.
          Length = 604

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = +1

Query: 19  LFLDPLTVLVENYSSSTCRVKSKISKTF*LRRGGKTPNRSK*RRTL*NVKFKVRCSRFLY 198
           ++ +PL +L++   S   +  +K   T  +   G TP++ + +R L N K+  +  RF+ 
Sbjct: 179 VYKEPLDLLMDTIESIASQPNAKEKITCLVGMEGGTPDKEEKKRILDN-KYGPKFERFIV 237

Query: 199 T 201
           T
Sbjct: 238 T 238


>U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform b protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 196 YTLVITDKEKAEKLKQSLPPGLQVKEVK 279
           +T V+  K   EKL +  P GL +++VK
Sbjct: 435 FTAVVLVKTSGEKLLKQTPEGLDLEKVK 462


>U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform a protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 196 YTLVITDKEKAEKLKQSLPPGLQVKEVK 279
           +T V+  K   EKL +  P GL +++VK
Sbjct: 393 FTAVVLVKTSGEKLLKQTPEGLDLEKVK 420


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,528,423
Number of Sequences: 27780
Number of extensions: 112429
Number of successful extensions: 340
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)