Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_P20
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 216 3e-57
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 31 0.27
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 1.9
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 27 3.3
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 3.3
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 5.8
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 26 7.7
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 7.7
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 216 bits (528), Expect = 3e-57
Identities = 113/240 (47%), Positives = 147/240 (61%), Gaps = 3/240 (1%)
Frame = +3
Query: 132 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 311
EV I SAVRTPM + A+ER I ++ EV++GNV SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 312 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 491
Q PARQ + AGLP+S +CTTVNKVCASGMK+ +L AQ + TG +I++AGG ESMSN P
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 492 FYLKRGE--TSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 665
+Y + YG ++LVDG++ DGL+D Y+ MGN AE A++ I R QD +A++S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 666 YKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNXEKFTKLSTVFQKENGT 842
YKR+ A KAF E+VPV VP RG P + E E K +N +K + VF K NGT
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVF-KSNGT 243
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 372 TVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSN 485
T CA+G +I A ++ G D+I+AGG ES N
Sbjct: 165 TTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCIN 202
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 19 LRSSWLLCPTETSSYWTLTSYCRYLQ 96
L W+L P ETS+Y +TS Y+Q
Sbjct: 139 LNLQWVLMPLETSAYSLVTSTPAYIQ 164
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 172 EPIGVLTADAITTSLRETLVENAAIAVNICNKTLKSNKTMFLL 44
E +G+L D + L + +VEN + K L +N+T +LL
Sbjct: 295 ESLGLLVDDRV--DLAKGMVENFIFEITYYGKILNANRTYYLL 335
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 3.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 639 DQDEYAVNSYKRSAAAYEA-KAFVDELVPVPVPQKRGAPVIFAEXEXYKRVNXEK 800
++ +YA +S + A YE K + L+ +PV Q VIF + Y RV EK
Sbjct: 208 NESDYA-SSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRVYVEK 261
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 332 CNICRFAKKYHMYNCKQSMC 391
CN+C + KY NC S C
Sbjct: 102 CNVCGYWGKYACQNCGTSYC 121
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 151 ADAITTSLRETL-VENAAIAVNICNKTLKSNKTMFLLD 41
++ I S+R T+ +E A +A +CN + NK +LD
Sbjct: 358 SEHIELSVRRTVGIEKALLAAALCNNSKVHNKADSILD 395
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 568 MCTTNFTWEIVLKTQQKNYKLLDKIKMNMLSIVTREV 678
+ + + W + KT++ YKL+ M + S+V E+
Sbjct: 409 IAASGYVWHVGSKTERSRYKLMLDCVMIITSVVPSEL 445
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,209,088
Number of Sequences: 5004
Number of extensions: 64118
Number of successful extensions: 222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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