Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P17
         (829 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QPR8 Cluster: IP03474p; n=5; Endopterygota|Rep: IP034...    76   1e-12
UniRef50_Q4T4I3 Cluster: Chromosome undetermined SCAF9631, whole...    58   2e-07
UniRef50_UPI00015B5790 Cluster: PREDICTED: similar to GA13019-PA...    58   3e-07
UniRef50_UPI0000E49E6A Cluster: PREDICTED: similar to GA13019-PA...    53   1e-05
UniRef50_Q9NAA4 Cluster: Putative uncharacterized protein; n=2; ...    43   0.008
UniRef50_Q54KD0 Cluster: TPR repeat-containing protein; n=1; Dic...    36   0.94 
UniRef50_UPI000155BE11 Cluster: PREDICTED: hypothetical protein,...    35   2.2  

>UniRef50_Q4QPR8 Cluster: IP03474p; n=5; Endopterygota|Rep: IP03474p
           - Drosophila melanogaster (Fruit fly)
          Length = 82

 Score = 75.8 bits (178), Expect = 1e-12
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = +2

Query: 56  LGHWKLXVGXXAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 235
           +G W L V    MY +FPV LF  FNQP+YFEEWVT  KR+++PPE++   E +Q+ I++
Sbjct: 1   MGTWVLEVAKMGMYMAFPVTLFHLFNQPEYFEEWVTKKKRELYPPESKSHHEELQRAIRE 60


>UniRef50_Q4T4I3 Cluster: Chromosome undetermined SCAF9631, whole
           genome shotgun sequence; n=13; Euteleostomi|Rep:
           Chromosome undetermined SCAF9631, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 78

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 23/65 (35%), Positives = 41/65 (63%)
 Frame = +2

Query: 68  KLXVGXXAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKK 247
           K+ +    +Y SFPV +F+  NQ +YFEE++   KR+IFPP+ +  R+ ++   + MR +
Sbjct: 4   KIEIFRMMLYLSFPVAMFWISNQAEYFEEYIVKRKREIFPPDEEFHRKHLEDFKERMRAR 63

Query: 248 QMQSL 262
           + Q +
Sbjct: 64  KEQRI 68


>UniRef50_UPI00015B5790 Cluster: PREDICTED: similar to GA13019-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA13019-PA - Nasonia vitripennis
          Length = 89

 Score = 58.0 bits (134), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +2

Query: 65  WKLXVGXXAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMR- 241
           W+  V    MY SFPV  F +FN P+ FEE VT  K+  +PP +   RE I+ +I+++  
Sbjct: 10  WQWEVAKMFMYMSFPVMCFHYFNTPQIFEEEVTKIKKLHYPPTSPEQREEIENMIREVNA 69

Query: 242 KKQMQSLE 265
           K+++++L+
Sbjct: 70  KRELRALK 77


>UniRef50_UPI0000E49E6A Cluster: PREDICTED: similar to GA13019-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to GA13019-PA - Strongylocentrotus purpuratus
          Length = 79

 Score = 52.8 bits (121), Expect = 1e-05
 Identities = 21/59 (35%), Positives = 39/59 (66%)
 Frame = +2

Query: 89  AMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLE 265
           ++Y  FPV +F++FNQ   FE +V+   ++++PPE++  R+ ++ L Q MR K  + L+
Sbjct: 2   SIYVMFPVTMFYYFNQTDLFETYVSKKVKEMYPPESKMHRQELESLRQRMRIKYEEKLK 60


>UniRef50_Q9NAA4 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 90

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 20/68 (29%), Positives = 37/68 (54%)
 Frame = +2

Query: 56  LGHWKLXVGXXAMYTSFPVGLFFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQD 235
           +G WKL  G   +  +FPVG F+ FNQP  F+E++   +       ++   E  ++L+  
Sbjct: 1   MGGWKLETGRFLLLITFPVGAFWLFNQPTIFKEFMRGYRIPDSSAGDKAMAEFKEQLLAT 60

Query: 236 MRKKQMQS 259
            RK++ ++
Sbjct: 61  KRKEEYEN 68


>UniRef50_Q54KD0 Cluster: TPR repeat-containing protein; n=1;
           Dictyostelium discoideum AX4|Rep: TPR repeat-containing
           protein - Dictyostelium discoideum AX4
          Length = 1663

 Score = 36.3 bits (80), Expect = 0.94
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 119 FFFFNQPKYFEEWVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLE 265
           FF+F  P Y EE V+   +  F  E Q  +E ++KL Q++ K   +S E
Sbjct: 504 FFYFRDPYYLEE-VSQMDKNNFVSEGQRSKEKLEKLKQEIIKSPFKSSE 551


>UniRef50_UPI000155BE11 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 71

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 92  MYTSFPVGLFFFFNQPKYFEEWVTNTK 172
           +Y SFPV +F+  NQ  YFEE+V   K
Sbjct: 3   LYLSFPVAMFWISNQADYFEEYVIKRK 29


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,246,306
Number of Sequences: 1657284
Number of extensions: 14419909
Number of successful extensions: 31130
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31127
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)