Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_P17
(829 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 29 0.069
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.49
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 0.85
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 0.85
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 25 1.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 2.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 4.6
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 28.7 bits (61), Expect = 0.069
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 166 YKKTNLPTRKPT**RSDSKINTGYEEETNAKSGIQVNQVYK*YNLVFVVKRY*IHYV 336
Y K+ P R P + D+ + G+ + TN K+ + VN+ YK NL + Y HYV
Sbjct: 415 YLKSRDPERTPY--QWDNSTSAGFSQ-TN-KTWLPVNENYKSLNLAAQKREYYSHYV 467
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.49
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 125 FFNQPKYFEE-WVTNTKRQIFPPENQHDREAIQKLIQDMRKKQMQSLE 265
F N K+ ++ +V N+K + +HD ++ LI D+RKKQ++SLE
Sbjct: 340 FINILKFLKQKYVKNSKLE---KVIKHD--ILRMLIIDLRKKQLKSLE 382
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.85
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 610 VIPSLWKSF-MNNFSLKCLFCDIAKKLYS*YNLV-AVPYQLAVNYC 741
+I SL ++ NN + K L+C+ KKLY N + +P + + YC
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI-YC 125
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 0.85
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 610 VIPSLWKSF-MNNFSLKCLFCDIAKKLYS*YNLV-AVPYQLAVNYC 741
+I SL ++ NN + K L+C+ KKLY N + +P + + YC
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQIPIPVPI-YC 125
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 733 NYCSRIAHILLLNSVF 780
N CSR+ ILL+++VF
Sbjct: 3 NICSRLGRILLISAVF 18
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 610 VIPSLWKSF-MNNFSLKCLFCDIAKKLYS*YNLV-AVPYQLAVNYC 741
+I SL ++ NN + K L+C+ +KLY N + +P + + YC
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIEQIPIPVPI-YC 125
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.4 bits (48), Expect = 2.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 464 LLIHL*NYLMNPN*ISFLNTHCSMNFVTFNSL 369
LL+ + N ++ P ISF N S ++ FN L
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 464 LLIHL*NYLMNPN*ISFLNTHCSMNFVTFNSL 369
LL+ + N ++ P ISF N S ++ FN L
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 464 LLIHL*NYLMNPN*ISFLNTHCSMNFVTFNSL 369
LL+ + N ++ P ISF N S ++ FN L
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCL 127
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 6/32 (18%)
Frame = +3
Query: 45 IFKLWVIGNXQ---WVG---WLCTHHFLLDCS 122
+FK+W+ G+ W+ W+CT L C+
Sbjct: 127 VFKVWIFGDLWCSIWLAVDVWMCTASILNLCA 158
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,259
Number of Sequences: 438
Number of extensions: 4811
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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