Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P15
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    40   2e-05
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    26   0.37 
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    26   0.37 
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    25   0.64 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   3.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.0  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   6.0  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151  RGIKGDQGSIGPPGIPGLQGDYGADGLEGRIGLPGVPGDWGERGDFGDKGERGTEGSYG- 327
            +G++G Q + G  G+ G+QG  G  G++G  G+PG+    G +  FG +G +G    YG 
Sbjct: 842  QGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLL--QGVQQVFG-QGVQGMNVPYGM 898

Query: 328  RRGDEGPQ 351
            +RG  G Q
Sbjct: 899  QRGQSGGQ 906



 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
 Frame = +1

Query: 289  GDKGERGTEGSYGRRGDEGPQGLPGLEGVFGFPG-LDGCSXXXXXXXXXXXXXXXXXRGI 465
            G +G +  +G  G +G +G QG+ G++GV G PG L G                   RG 
Sbjct: 843  GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLLQGVQQVFGQGVQGMNVPYGMQRGQ 902

Query: 466  PG--PYGEKGLQGLAGEGGVNSRGAKGDQGDGGXPXSYGLP 582
             G   +    +QG+A  G  +   A G Q  GG    Y  P
Sbjct: 903  SGGQTWSNSQVQGVAVPG--SGIVASGQQHAGGWQSIYAQP 941



 Score = 31.9 bits (69), Expect = 0.006
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
 Frame = +1

Query: 295  KGERGTEGSYGRRGDEGPQGLPGLEGVFGFPGLDGCSXXXXXXXXXXXXXXXXXRGIPGP 474
            +G +G + + G +G +G QG+ G++GV G  G+ G                   +G+  P
Sbjct: 842  QGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPG------LLQGVQQVFGQGVQGMNVP 895

Query: 475  YG-EKGLQGLAGEGGVNSRGAKGDQGDGGXPXSYGLPXPQGWRGDSGLPGDEGDQ 636
            YG ++G  G  G+   NS+  +G    G    + G     GW+     P    DQ
Sbjct: 896  YGMQRGQSG--GQTWSNSQ-VQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQ 947


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 181 GPPGIPGLQGDYGADGLEGR 240
           GPPG+PG  GD+     E R
Sbjct: 333 GPPGVPGDHGDHAPKQTEVR 352



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 601 GDSGLPGDEGDQXP 642
           G  G+PGD GD  P
Sbjct: 333 GPPGVPGDHGDHAP 346



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 244 GLPGVPGDWGE 276
           G PGVPGD G+
Sbjct: 333 GPPGVPGDHGD 343



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 187 PGIPGLQGDYG 219
           PG PG+ GD+G
Sbjct: 332 PGPPGVPGDHG 342


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 181 GPPGIPGLQGDYGADGLEGR 240
           GPPG+PG  GD+     E R
Sbjct: 333 GPPGVPGDHGDHAPKQTEVR 352



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 601 GDSGLPGDEGDQXP 642
           G  G+PGD GD  P
Sbjct: 333 GPPGVPGDHGDHAP 346



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 244 GLPGVPGDWGE 276
           G PGVPGD G+
Sbjct: 333 GPPGVPGDHGD 343



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 187 PGIPGLQGDYG 219
           PG PG+ GD+G
Sbjct: 332 PGPPGVPGDHG 342


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 181 GPPGIPGLQGDY 216
           GPPG+PG  GD+
Sbjct: 272 GPPGVPGDHGDH 283



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 601 GDSGLPGDEGDQXP 642
           G  G+PGD GD  P
Sbjct: 272 GPPGVPGDHGDHAP 285



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 244 GLPGVPGDWGE 276
           G PGVPGD G+
Sbjct: 272 GPPGVPGDHGD 282



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 187 PGIPGLQGDYG 219
           PG PG+ GD+G
Sbjct: 271 PGPPGVPGDHG 281


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +1

Query: 469 GPYGEKGLQGLAGEGGVNSRGAKGDQGDGGXPXSYG 576
           G  G +G  G  G  G N++   GD  +      YG
Sbjct: 87  GKGGSRGRGGNRGRTGFNNKNKDGDDNNDYEDNDYG 122


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -1

Query: 136 SDYRPL*KQELDSRRISEEQRAQDVAREGAHAPGPTWLRHTHR 8
           ++++PL ++ +D    +EE     VA +  H P    +   HR
Sbjct: 332 NEHQPLQRENMDMVAQNEETLQTVVAMKMMHLPQSNKMNRMHR 374


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 265 LPAHRVNQFFLQVHLLRSPLEGLGCPEGLCFL 170
           LPA R+N         +SPL    CP+GL  L
Sbjct: 48  LPAPRINS--------KSPLLSCACPDGLKLL 71


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 265 LPAHRVNQFFLQVHLLRSPLEGLGCPEGLCFL 170
           LPA R+N         +SPL    CP+GL  L
Sbjct: 48  LPAPRINS--------KSPLLSCACPDGLKLL 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.148    0.486 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,148
Number of Sequences: 438
Number of extensions: 3343
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)