Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P13
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0374 - 15078721-15079350                                         29   6.1  
12_01_0929 - 9229172-9229483,9230009-9230359                           28   8.1  

>04_03_0374 - 15078721-15079350
          Length = 209

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 288 MTMPKYKV*NCLVFVNSSVNFKRLLFDKD*K*TQNTTILLVVVSHREVQSLKINGQLSNS 467
           M + K K+   ++ V   V FK+ L     K ++  T+ L+V    EVQ+ K+   +  +
Sbjct: 1   MALRKMKLQRIVIDVKRQVTFKKRLNGLTKKVSEFATLFLMVYGEVEVQATKVWPLVWKA 60

Query: 468 SRLI*H 485
           +R++ H
Sbjct: 61  TRVLEH 66


>12_01_0929 - 9229172-9229483,9230009-9230359
          Length = 220

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 700 YHTWSSWRSGTGYSVCGWNTADSSFTNPFNTI 795
           YH+W S  S +G    G +T+ SS + PFN++
Sbjct: 26  YHSWGSNGSSSG---SGSSTSSSSSSRPFNSV 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,504,848
Number of Sequences: 37544
Number of extensions: 420005
Number of successful extensions: 952
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)