Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P13
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.0  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   6.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.7  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 714 IMEVRHRLQCLRLEHSRFQFHKSFQH 791
           +++++ + Q  +L HS  Q+H+  QH
Sbjct: 61  VIQLQQQQQQQQLHHSPHQYHQQVQH 86


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 306 KV*NCLVFVNSSVNF 350
           KV N LV +NSSVNF
Sbjct: 346 KVSNLLVTINSSVNF 360


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 601 YLWYWTREEICKHPVLRNTRQSDIYS 524
           YL++   E IC  P  +NTR   IY+
Sbjct: 853 YLYHIRMELICPIPEEQNTRGRKIYA 878


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 234 HNGCPSRPPRLHF 272
           H GCP RPP   +
Sbjct: 252 HGGCPWRPPNFKY 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,462
Number of Sequences: 2352
Number of extensions: 17258
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)