Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P09
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.2  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.7  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 317 MPLTSSGRNVMVLLKMQSYLSHCTEYSCYSTGPGL 421
           M L     NV +LL M  +     +YS  +  PGL
Sbjct: 85  MSLKEKNPNVKILLSMGGWNEGSQKYSQVAANPGL 119


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 317 MPLTSSGRNVMVLLKMQSYLSHCTEYSCYSTGPGL 421
           M L     NV +LL M  +     +YS  +  PGL
Sbjct: 85  MSLKEKNPNVKILLSMGGWNEGSQKYSQVAANPGL 119


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 327 VRGISHAAVENSPSW 283
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 327 VRGISHAAVENSPSW 283
           VR + H  +EN P+W
Sbjct: 83  VRKVIHHLIENKPNW 97


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 413 DQLSSSCTPYNVRGRTASSVKPSHSSQMR 327
           D LSS CT  N + +  +     H +Q R
Sbjct: 68  DALSSGCTKCNQKQKETAEKVIRHLTQKR 96


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = +3

Query: 495 NDTVIRQCQ*DSRFVTRTILGLARICQLPFLLHLEEQS*TGEGTIKVSMGSGNH 656
           ND  + +C   S+  +        +  LPF+  +E+Q+    GT+ V      H
Sbjct: 484 NDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGH 537


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,632
Number of Sequences: 336
Number of extensions: 4630
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)