Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_P08
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 98 8e-21
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 42 5e-04
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 41 0.001
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 40 0.002
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 40 0.002
AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transpor... 40 0.002
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 40 0.002
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 39 0.005
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 39 0.005
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 38 0.006
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 36 0.034
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 35 0.060
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 35 0.060
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 35 0.079
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.18
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 33 0.18
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 29 3.0
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 97.9 bits (233), Expect = 8e-21
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = +3
Query: 303 WKLCTGVSLAIGARYFLYRSPVFCKAVQTSRVIQRRPNFQEDTAKFDWEKLLNYLKPHKW 482
W++C G +GA + C A + S+ I ++ A +L N +KP
Sbjct: 42 WRIC-GFGAGLGA---VTLRKAAC-APKLSKRIDHLRTTEDQNASMTAGELWNLIKPFFG 96
Query: 483 LLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGI---RNNPAADFIDEIKMPAFKLISLYV 653
AAV A+ A++N+ IP LG +VN + I +N +++K A L++LYV
Sbjct: 97 WFFAAVVCAILSAYINIQIPLCLGDLVNGIVKIIKDESNNLRSHFEQLKPSALHLMTLYV 156
Query: 654 GQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
Q+A TF YI L+ +GE++AT+M+ DLF +L D+ FFD ++GEL RL
Sbjct: 157 AQSALTFLYITFLTVLGERMATKMRSDLFQKLLHHDMAFFDSHKSGELSARL 208
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +3
Query: 390 SRVIQRRPNFQEDTAKF-DWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVN 566
S V +R +++ A + D + +L+ P+KW ++ + + + ++ P +LG +++
Sbjct: 121 SVVETKRESYKLKNASWKDLKAILSLAGPYKWRIMLGISFLGISSSIFLFTPRVLGKLID 180
Query: 567 VLAGIR------NNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMK 728
+ N+ A K L +++ A I+ + G+ V ++
Sbjct: 181 EWDETKQDKMDPNDKALLLARFFKENPIALAGVFMLGAIAIAARIYCMHTAGQLVINDLR 240
Query: 729 QDLFVSILRQDIEFFDKERTGELXNRL 809
+ +F S+LRQD+ FFDK + GE+ +RL
Sbjct: 241 KSVFNSVLRQDMAFFDKNKVGEIVSRL 267
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 597 ADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFD 776
A+F E+ K + L G A F + EK++ + ++ F S++RQ+I ++D
Sbjct: 96 AEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFHSVMRQEIAWYD 155
Query: 777 KERTGELXNRL 809
K +G L N+L
Sbjct: 156 KNTSGTLSNKL 166
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +3
Query: 420 QEDTAKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAA 599
+E K + K+L Y +P +W+ I A+ A + + + + + + +NP
Sbjct: 684 EEGAVKANLFKILRYARP-EWIYIFF---AIIAALIQGAVMPAFSLFFSQIINVFSNPDR 739
Query: 600 DFIDEI-KMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFD 776
D + + A + L Q F L E++ +++ ++ ++LRQD +FD
Sbjct: 740 DQMKKDGHFWALMFLVLAAVQGTSMLFQCSLFGVAAERLTMRIRSKVYRNVLRQDATYFD 799
Query: 777 --KERTGELXNRL 809
K G + RL
Sbjct: 800 MPKHSPGRITTRL 812
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 597 ADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFD 776
A+F E+ K + L G A F + EK++ + ++ F S++RQ+I ++D
Sbjct: 96 AEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFHSVMRQEIAWYD 155
Query: 777 KERTGELXNRL 809
K +G L N+L
Sbjct: 156 KNTSGTLSNKL 166
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +3
Query: 420 QEDTAKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAA 599
+E K + K+L Y +P +W+ I A+ A + + + + + + +NP
Sbjct: 684 EEGAVKANLFKILRYARP-EWIYIFF---AIIAALIQGAVMPAFSLFFSQIINVFSNPDR 739
Query: 600 DFIDEI-KMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFD 776
D + + A + L Q F L E++ +++ ++ ++LRQD +FD
Sbjct: 740 DQMKKDGHFWALMFLVLAAVQGTSMLFQCSLFGVAAERLTMRIRSKVYRNVLRQDATYFD 799
Query: 777 --KERTGELXNRL 809
K G + RL
Sbjct: 800 MPKHSPGRITTRL 812
>Z81044-9|CAB02812.2| 677|Caenorhabditis elegans Hypothetical
protein C30H6.6 protein.
Length = 677
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +3
Query: 441 DWEKLLNYLKP-HKWLLIAAVGSALAVAFLNVY--IPAMLGVIVNVLAGIRNNPAADFID 611
D +L KP KW+ + G++ V ++ IP +LG +++ A+ +
Sbjct: 70 DLVELYEIAKPFRKWIFL---GTSFMVVSSGIFLIIPRILGKLIDQFDSNTGVQKAEEVF 126
Query: 612 EIKMPAF------KLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFF 773
+K+ + L+ L A T ++ L G + +++ ++ SI+RQD+ FF
Sbjct: 127 TMKIAKYFKEQPMSLVGLLAIGALATAAKVYCLQIAGVNIVGSLRKMVYSSIIRQDMTFF 186
Query: 774 DKERTGELXNR 806
DK GE+ +R
Sbjct: 187 DKNMVGEIGSR 197
>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical protein
F42E11.1 protein.
Length = 1266
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%)
Frame = +3
Query: 405 RRPNFQEDTAKFDWEKLLNYLKPHKWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIR 584
R +E + + + KP K ++ A+ + + PA V+ L +
Sbjct: 679 REEMIEEGAMEASMMDIFRFAKPEKMNIVIAL---IFTLIRGITWPAF-SVVYGQLFKVF 734
Query: 585 NNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDI 764
D + + + L V A TF LL + GE ++++++ D+F +I++QD
Sbjct: 735 AEGGEDLPVNALISSLWFVLLAVTSAVTTFISGSLLGKTGETMSSRLRMDVFKNIMQQDA 794
Query: 765 EFFD--KERTGELXNRL 809
+FD K G L +RL
Sbjct: 795 TYFDDPKHNVGNLTSRL 811
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 669 TFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
T+F L + E+ +++ L S+LRQD ++FD+ G L ++
Sbjct: 111 TYFSNACLFTMAERRLYCIRKHLLQSVLRQDAKWFDENTVGGLTQKM 157
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 450 KLLNYLKPHKWLL-IAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMP 626
+LL Y K +WL I+ + +++P G ++ + ++ PA I M
Sbjct: 170 RLLQYCK-REWLWHISGFSWLFIYSITRIFVPYYTGQVIATVVATKSYPALSNAVYI-MT 227
Query: 627 AFKLIS-LYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXN 803
L+S + G +F Y + ++ ++ DLF +++QD+ F+D +TGE+ +
Sbjct: 228 IISLVSAVAAGFRGGSFEYAYA------RIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTS 281
Query: 804 RL 809
RL
Sbjct: 282 RL 283
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 40.7 bits (91), Expect = 0.001
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +3
Query: 450 KLLNYLKPHKWLLIAAVGSALAV-AFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMP 626
+LL+Y H+W A+ L V A V+IP +++ + R A +
Sbjct: 187 RLLSYCG-HQWPWFASGFVFLTVYALARVFIPNYTAQVISDIVNKRGIQALIHSIIVLTC 245
Query: 627 AFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNR 806
SL+ G F Y L V +++ DLF S++RQDI F+D +TG+ +R
Sbjct: 246 LTATSSLFGGLRGGCFDYATAL------VTLRIRLDLFTSLIRQDIAFYDTAKTGDTMSR 299
Query: 807 L 809
L
Sbjct: 300 L 300
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 606 IDEIKMPAFKLISLYVGQAAFTFF--YIHL--LSQVGEKVATQMKQDLFVSILRQDIEFF 773
+DE K Y+ FF Y+ + E++ +++Q+ +ILRQ I++F
Sbjct: 110 LDEFNSEVVKYCIYYLVLGVLMFFTSYVQIACFESYAERLVHKLRQNYLKAILRQQIQWF 169
Query: 774 DKERTGELXNRL 809
DK++TG L RL
Sbjct: 170 DKQQTGNLTARL 181
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 672 FFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKER--TGELXNR 806
F + L + GE + +++ + F ++LRQDI F+D R TG+L R
Sbjct: 766 FTSANCLGRCGESLTMKLRFEAFKNLLRQDIAFYDDLRHGTGKLCTR 812
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 606 IDEIKMPAFKLISLYVGQAAFTFF--YIHL--LSQVGEKVATQMKQDLFVSILRQDIEFF 773
+DE K Y+ FF Y+ + E++ +++Q+ +ILRQ I++F
Sbjct: 110 LDEFNSEVVKYCIYYLVLGVLMFFTSYVQIACFESYAERLVHKLRQNYLKAILRQQIQWF 169
Query: 774 DKERTGELXNRL 809
DK++TG L RL
Sbjct: 170 DKQQTGNLTARL 181
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 672 FFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKER--TGELXNR 806
F + L + GE + +++ + F ++LRQDI F+D R TG+L R
Sbjct: 766 FTSANCLGRCGESLTMKLRFEAFKNLLRQDIAFYDDLRHGTGKLCTR 812
>AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform b protein.
Length = 674
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 531 VYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPAFKLIS-LYVGQAAFTFFYIHLLSQVGE 707
V+IP G +V + G + + M L S ++ G +F Y H
Sbjct: 220 VFIPYYTGEVVTAVFGDKASYEKLHKTVFIMGMLSLASTVFGGLRGGSFTYAHAT----- 274
Query: 708 KVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
+ Q++ DLF S+++Q+I FFD +TGE+ +RL
Sbjct: 275 -IDRQIRNDLFRSVVKQEIGFFDMNKTGEICSRL 307
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 531 VYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPAFKLIS-LYVGQAAFTFFYIHLLSQVGE 707
V+IP G +V + G + + M L S ++ G +F Y H
Sbjct: 220 VFIPYYTGEVVTAVFGDKASYEKLHKTVFIMGMLSLASTVFGGLRGGSFTYAHAT----- 274
Query: 708 KVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
+ Q++ DLF S+++Q+I FFD +TGE+ +RL
Sbjct: 275 -IDRQIRNDLFRSVVKQEIGFFDMNKTGEICSRL 307
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Frame = +3
Query: 465 LKPHKWLLIAAVGSA---LAVAFLNVYIPAMLGVIVNVLAG--IRNNPAADFIDEIKMPA 629
L H W ++ G A+ + + L +I L G + N D IK
Sbjct: 39 LSEHLWEIVKLCGKQWRWFVPAYTLLILDCALNLIEPALYGQMMTNAIQMKSFDIIKRAC 98
Query: 630 FKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
L + +A + + A ++ LF SIL Q+I FFD+ +TG+L +R+
Sbjct: 99 LLLALIQFSEATCKSACYFFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRI 158
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 38.7 bits (86), Expect = 0.005
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Frame = +3
Query: 387 TSRVIQRRPNFQEDTAKFDWEKLLNYLKPHKWLLIAAVGSA---LAVAFLNVYIPAMLGV 557
TSR + +K + EK L L H W ++ + A++ +++ +L +
Sbjct: 190 TSRSSSTDEEDNDAVSKEEKEKRLPLLT-HLWQIVKLCSVQWKWFSAAYVLLFVDCILNL 248
Query: 558 IVNVLAGIRNNPAADF--IDEIKMPAFKLISLYVGQAAF-TFFYIHLLSQVGEKV-ATQM 725
I L + A D +K L ++ +A T YI + Q E++ A +
Sbjct: 249 IEPALYSQMMSTAIRMKSFDVLKRACIVLAAVQFTEATVNTVRYICM--QYAERLTARNI 306
Query: 726 KQDLFVSILRQDIEFFDKERTGELXNRL 809
+ LF +IL QDI FFD +TG+L +R+
Sbjct: 307 RVSLFRAILHQDISFFDDNKTGQLMSRI 334
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Frame = +3
Query: 372 CKAVQTSRVIQRRPNFQEDTAKFDWEKLLNYLKPHKWL-LIAAVGSALAVAFLNVYIPAM 548
CK ++ ++ NF + T F + Y K +L ++ ++ + + F + +
Sbjct: 35 CKFIKV--IVGSTNNFLKKTFGFQIKCTTRYEKLLFFLGVVFSILTGMCQPFESYTLGET 92
Query: 549 LGVIVNVLAGIRNNPAADFID--------EIKMPAFKLISLYVGQAAFTFFYIH--LLSQ 698
V+V V I NN D +D E M L+ VG A FTF ++ ++
Sbjct: 93 SQVLVKVTNAI-NNKTIDPVDLAHAYKLFESDMNRVVLLFFLVGFAYFTFGFLQFSIMKF 151
Query: 699 VGEKVATQMKQDLFVSILRQDIEFFDKERTGEL 797
VG+ A +++ +LR+DI +FD TG L
Sbjct: 152 VGDNTAYNVRRQYISRLLRKDISYFDGMSTGHL 184
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 582 RNNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQD 761
+N DF ++ + ++ VG A + V E++ +++++ SILRQ+
Sbjct: 124 QNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQIIVTCYLYVAEQMNNRLRREFVKSILRQE 183
Query: 762 IEFFDKERTGELXNRL 809
I +FD +G L +L
Sbjct: 184 ISWFDTNHSGTLATKL 199
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 582 RNNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQD 761
+N DF ++ + ++ VG A + V E++ +++++ SILRQ+
Sbjct: 124 QNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQE 183
Query: 762 IEFFDKERTGELXNRL 809
I +FD +G L +L
Sbjct: 184 ISWFDTNHSGTLATKL 199
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 687 LLSQVGEKVATQMKQDLFVSILRQDIEFFDKER--TGELXNRL 809
LL + GE ++ +++ D+F +I++QD +FD R G L +RL
Sbjct: 771 LLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNVGSLTSRL 813
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 483 LLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAAD--FIDEIKMPAFKLISLYVG 656
L+++AV AL V F ++ + ++ + +N F EIKM F L Y+G
Sbjct: 50 LILSAVNGAL-VPFNSLIFEGIANALMEGESQYQNGTINMPWFSSEIKM--FCLRYFYLG 106
Query: 657 QAAF--TFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
A F ++F L + E+ +++ S+LRQD ++FD+ G L ++
Sbjct: 107 VALFLCSYFANSCLYTLCERRLHCIRKKYLKSVLRQDAKWFDETTIGGLTQKM 159
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 687 LLSQVGEKVATQMKQDLFVSILRQDIEFFDKER--TGELXNRL 809
LL + GE ++ +++ D+F +I++QD +FD R G L +RL
Sbjct: 771 LLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNVGSLTSRL 813
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 483 LLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAAD--FIDEIKMPAFKLISLYVG 656
L+++AV AL V F ++ + ++ + +N F EIKM F L Y+G
Sbjct: 50 LILSAVNGAL-VPFNSLIFEGIANALMEGESQYQNGTINMPWFSSEIKM--FCLRYFYLG 106
Query: 657 QAAF--TFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
A F ++F L + E+ +++ S+LRQD ++FD+ G L ++
Sbjct: 107 VALFLCSYFANSCLYTLCERRLHCIRKKYLKSVLRQDAKWFDETTIGGLTQKM 159
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 687 LLSQVGEKVATQMKQDLFVSILRQDIEFFDKER--TGELXNRL 809
LL + GE ++ +++ D+F +I++QD +FD R G L +RL
Sbjct: 757 LLGKAGETMSGRLRMDVFRNIMQQDASYFDDSRHNVGSLTSRL 799
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 483 LLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAAD--FIDEIKMPAFKLISLYVG 656
L+++AV AL V F ++ + ++ + +N F EIKM F L Y+G
Sbjct: 50 LILSAVNGAL-VPFNSLIFEGIANALMEGESQYQNGTINMPWFSSEIKM--FCLRYFYLG 106
Query: 657 QAAF--TFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
A F ++F L + E+ +++ S+LRQD ++FD+ G L ++
Sbjct: 107 VALFLCSYFANSCLYTLCERRLHCIRKKYLKSVLRQDAKWFDETTIGGLTQKM 159
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 34.7 bits (76), Expect = 0.079
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Frame = +3
Query: 477 KWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRN---NPAADFID--------EIKM 623
K+L + V +L ++ LG VL I N N D D E M
Sbjct: 40 KFLFLIGVFFSLVTGLCQPFVSYTLGETAQVLVTITNAINNKTIDPADLKKAYEQYERGM 99
Query: 624 PAFKLISLYVGQAAFTFFYIH--LLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGEL 797
L G A FTF I ++ VG+ ++++ +LR+D E+FD TG L
Sbjct: 100 YQVVLYFFLCGCAYFTFASIQHAIMKYVGDNTTYRVRKQYISRLLRKDAEYFDNVSTGHL 159
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 267 SSKSGESLPCSPWKLCTGVSLAIGARYFLYRSPVFCKAVQTSRVIQRRPNFQEDTAKFDW 446
S+K GE + C + TG + + R+F + P++ + + S I ++ F+ED K DW
Sbjct: 1004 SAKQGEEV-CIKIENTTGEAPRLYGRHFTHEDPLYSRVTRESIDICKK-YFREDLTKADW 1061
Query: 447 EKLLNYLK 470
+ ++ K
Sbjct: 1062 QLVVQLKK 1069
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 267 SSKSGESLPCSPWKLCTGVSLAIGARYFLYRSPVFCKAVQTSRVIQRRPNFQEDTAKFDW 446
S+K GE + C + TG + + R+F + P++ + + S I ++ F+ED K DW
Sbjct: 1103 SAKQGEEV-CIKIENTTGEAPRLYGRHFTHEDPLYSRVTRESIDICKK-YFREDLTKADW 1160
Query: 447 EKLLNYLK 470
+ ++ K
Sbjct: 1161 QLVVQLKK 1168
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/86 (27%), Positives = 36/86 (41%)
Frame = +3
Query: 552 GVIVNVLAGIRNNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHLLSQVGEKVATQMKQ 731
G I N L I N + DF D + + + F ++ ++MKQ
Sbjct: 115 GNITNSLL-IHNATSDDFYDSAMTNVWLFGGIGIIVLIVNFVQYMCFQYCCIRITSKMKQ 173
Query: 732 DLFVSILRQDIEFFDKERTGELXNRL 809
SILRQ+ +FDK +G L +L
Sbjct: 174 HYIQSILRQNAGWFDKNHSGTLTTKL 199
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 651 VGQAAFTFFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
+ + F FF + LL G + + + L ++LR + +FD G + NRL
Sbjct: 995 ITEVIFLFFSLVLLLIGGVAASKNLHKPLLHNVLRNPLSYFDITPIGRIINRL 1047
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical
protein F22E10.2 protein.
Length = 1324
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 612 EIKMPAFKLISLYVGQAAFT----FFYIHLLSQVGEKVATQMKQDLFVSILRQDIEFFDK 779
E K + + +++G F F +V ++ T M+ SILRQ+ +FDK
Sbjct: 130 EFKTKTMENVYIFLGLGIFVSINDFCQYMCFQRVCSRMMTVMRNRYISSILRQNAGWFDK 189
Query: 780 ERTGELXNRL 809
+G + RL
Sbjct: 190 NLSGTITTRL 199
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 510 LAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMPAFKLISLYVGQAAFTFFYIHL 689
L + L+++I ++L +++NV A + + DF +K AF LIS + +T + +L
Sbjct: 89 LCMLTLSIFIISILNLLINVPATLFSLLTKDF---VKSEAFLLISYIIDICHYTILFCNL 145
Query: 690 LSQV 701
+ V
Sbjct: 146 VIAV 149
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Frame = +3
Query: 477 KWLLIAAVGSALAVAFLNVYIPAMLGVIVNVLAGIRNNPAADFIDEIKMP-AFKLISLYV 653
K+L + V +L F ++ G + VL I N ID + A++ +
Sbjct: 40 KFLFLLGVLFSLMTGFCQPFMSYTFGEVSQVLVTITNAINNKTIDPADLEKAYEEYERGM 99
Query: 654 GQAAFTFFYI-----------H-LLSQVGEKVATQMKQDLFVSILRQDIEFFDKERTGEL 797
Q F FF H ++ VG+ ++++ +L++D ++FD TG L
Sbjct: 100 NQVVFHFFLCGCAYFIFASLQHAIMKYVGDNTTYRVRKQYISRLLKKDAQYFDSVSTGHL 159
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 708 KVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
+V QM+ S+LRQ+ +FDK +G + +L
Sbjct: 178 RVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKL 211
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 708 KVATQMKQDLFVSILRQDIEFFDKERTGELXNRL 809
+V QM+ S+LRQ+ +FDK +G + +L
Sbjct: 178 RVMAQMRHRFVYSVLRQNAGWFDKNHSGTITTKL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,046,772
Number of Sequences: 27780
Number of extensions: 352991
Number of successful extensions: 1012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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