Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_P06
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 63 4e-11
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 32 0.12
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 31 0.16
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 31 0.28
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 30 0.49
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 2.6
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 27 2.6
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 27 2.6
SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.5
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 4.6
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 4.6
SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr 3... 26 6.0
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 26 6.0
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 26 8.0
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 26 8.0
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 26 8.0
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 26 8.0
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 63.3 bits (147), Expect = 4e-11
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +2
Query: 596 IPKECNIDLPWYQGKVFYEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIF 775
+P E I W++ Y+++PASFKDSN DG GD +G+I+K+DY++ L V +I L I+
Sbjct: 4 VPSE-KIKPNWWRETSVYQIYPASFKDSNGDGFGDLEGIISKVDYLKALNVESIWLCPIY 62
Query: 776 QADHYPEDYNNVTSMLDIXRSLGVLKDL 859
+ Y +V+ I G L+DL
Sbjct: 63 PSPLKDMGY-DVSDYKQIDSRYGTLEDL 89
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 695 GDFKGLITKLDYIQNLGVAAIRLNYIFQ 778
G+++G+I KLDYIQ +G AI ++ I +
Sbjct: 62 GNWRGIIDKLDYIQGMGFTAIWISPIIK 89
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 695 GDFKGLITKLDYIQNLGVAAIRLNYI 772
G ++G+I KLDYIQ+LG A+ ++ I
Sbjct: 56 GTWRGIIQKLDYIQSLGCTAVWISPI 81
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 665 SFKDSNNDGTGDFKGLITKLDYIQNLGVAAI 757
SF DS+ G G + G+ +KLDYIQ +G AI
Sbjct: 52 SFDDSSYCG-GTWSGIRSKLDYIQGMGFNAI 81
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 674 DSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYI 772
D+N G +KG+ KLDYI+++G AI ++ I
Sbjct: 54 DANQYCGGTWKGIENKLDYIEDMGFNAIWISPI 86
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 647 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAI 757
Y+++ F++ GD G+ LDY+Q +GV A+
Sbjct: 91 YDIYETEFRNG-----GDIIGVRQSLDYLQGMGVKAV 122
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 695 GDFKGLITKLDYIQNLGVAAIRLNYIFQ 778
G + G+ LDYIQ +G AI ++ IF+
Sbjct: 66 GTWNGIRNHLDYIQGMGFDAIWISPIFE 93
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 695 GDFKGLITKLDYIQNLGVAAIRLNYI 772
G +KG+ LDYI++LG AI ++ I
Sbjct: 51 GTWKGITRNLDYIKSLGCTAIWISPI 76
>SPAC4D7.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 353 PVSAQLINNISMLDYQTLSKNGDLIIGQAEDVKLNGNLKINNRKLPSF 496
P Q+ I+ ++YQ LS +L++ V L+ ++N LP F
Sbjct: 507 PREIQMFGLINDINYQILSNMNNLVLLATIPVSLSSVFEVNYYYLPKF 554
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.6 bits (56), Expect = 4.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = +2
Query: 647 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIR------LNYIFQADHY-PEDY 802
Y+++ F++ GD GL LDY++ +G+ I LN + AD Y P DY
Sbjct: 90 YDIYETGFRNG-----GDIIGLKDSLDYLEIMGIKVIYIAGTPFLNQPWGADQYSPLDY 143
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +2
Query: 647 YEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRL------NYIFQADHY-PEDY 802
Y++ SF++ GD GL LDY++ LG I + N + AD Y P DY
Sbjct: 95 YDISEVSFRNG-----GDIVGLELSLDYLEGLGTQGIYIAGTPFVNMPWGADQYSPLDY 148
>SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 407 SKNGDLIIGQAEDVKLNGNLKINNRKL-PSFVNWNWVVIRKILLWV 541
+KNG L IG KLN + K + S V W+ ++ + LLW+
Sbjct: 251 TKNGSLKIGYMTGAKLNHDHKTQFFYVDQSLVFWSCMMDQMFLLWL 296
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 695 GDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVTSM 820
GD G L + N+G + NY+F D+ Y++V ++
Sbjct: 56 GDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETV 97
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 715 YQAFKITCAIIIGIFKTGRKY-FVKNLSLI 629
Y+ F I CA+ GI +T KY +K +S++
Sbjct: 179 YRLFVIYCALGFGITRTVPKYLMIKGISIV 208
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 715 YQAFKITCAIIIGIFKTGRKY-FVKNLSLI 629
Y+ F I CA+ GI +T KY +K +S++
Sbjct: 179 YRLFVIYCALGFGITRTVPKYLMIKGISIV 208
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 715 YQAFKITCAIIIGIFKTGRKY-FVKNLSLI 629
Y+ F I CA+ GI +T KY +K +S++
Sbjct: 151 YRLFVIYCALGFGITRTVPKYLMIKGISIV 180
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 8.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 715 YQAFKITCAIIIGIFKTGRKY-FVKNLSLI 629
Y+ F I CA+ GI +T KY +K +S++
Sbjct: 179 YRLFVIYCALGFGITRTVPKYLMIKGISIV 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,217,023
Number of Sequences: 5004
Number of extensions: 62502
Number of successful extensions: 159
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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