Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P06
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1287 - 25886509-25886766,25886887-25887004,25887098-258871...    31   0.90 
12_02_0272 - 16634765-16635004,16635412-16635457,16636107-166380...    30   2.1  
09_04_0463 - 17803120-17803233,17803647-17803758,17803866-178039...    29   3.6  
02_04_0150 - 20215070-20217577                                         29   6.4  
03_06_0124 - 31830797-31831371,31831510-31831532,31832143-318322...    28   8.4  

>08_02_1287 -
           25886509-25886766,25886887-25887004,25887098-25887177,
           25887258-25887338,25887493-25887576,25888013-25888171,
           25888660-25888752,25888928-25888945,25889194-25889280,
           25889634-25889760,25889849-25889920,25890319-25890404,
           25890519-25890626,25890709-25890850,25891432-25891508,
           25891902-25892054,25892411-25892503,25892608-25892790,
           25892924-25893334
          Length = 809

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 641 VFYEVFPASF---KDSNNDGTGDFKGLITKLDYIQNLGVAAIRL 763
           V YE+    F     SN +  G + G I+KLDY++ LGV  + L
Sbjct: 246 VIYEMHLRGFTKHSSSNVEHPGTYIGAISKLDYLKELGVNCVEL 289


>12_02_0272 -
           16634765-16635004,16635412-16635457,16636107-16638098,
           16639478-16640286
          Length = 1028

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 698 DFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVT 814
           DF G++ K++ +       +    IF +D  PE Y NV+
Sbjct: 316 DFHGMVYKMEPLNEFNSQKLFCKRIFDSDSIPEQYKNVS 354


>09_04_0463 -
           17803120-17803233,17803647-17803758,17803866-17803927,
           17804171-17804269,17804370-17804474,17804560-17804639,
           17806445-17806517,17806611-17806700,17807215-17807277,
           17808104-17808155,17808504-17808604,17809139-17809238,
           17809683-17809746,17810127-17810184,17810549-17810635,
           17810736-17810870,17810950-17811054,17811247-17811351,
           17811427-17811663,17812287-17812380,17812863-17813020,
           17813289-17813363,17813448-17813512,17814206-17814260
          Length = 762

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +2

Query: 641 VFYEVFPASF---KDSNNDGT--GDFKGLITKLDYIQNLGVAAIRLNYIFQAD 784
           V YE+   +F   + S  D T  G + GLI K+ ++  LGV A+ L  +F+ D
Sbjct: 232 VIYEMNVRAFTADESSGLDSTSRGSYLGLIDKIPHLLELGVNAVELLPVFEYD 284


>02_04_0150 - 20215070-20217577
          Length = 835

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 582 PMIAARQAMSPDSTTHSKIFRITTQFQFTKLGSFLLLI 469
           PM+ A  A+SPD  T  K F +TT    T LG+ L  +
Sbjct: 34  PMLVATFAVSPDLRTTEK-FMVTTTVLMTFLGAALFAV 70


>03_06_0124 -
           31830797-31831371,31831510-31831532,31832143-31832271,
           31833287-31834842
          Length = 760

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 599 PKECNIDLPWYQGKVFYEVFPASFKDSNNDGTGDFKGLITKLDYI 733
           P  C+ D+  + GKV  E+   +F  S ++ TG  + L   LD+I
Sbjct: 572 PASCSYDVYCF-GKVLLELITGNFGVSGSNDTGSEEWLARTLDFI 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,517,833
Number of Sequences: 37544
Number of extensions: 355801
Number of successful extensions: 763
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)