Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P06
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    65   7e-11
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    51   9e-07
AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical...    29   3.3  
U49829-5|AAK68351.1|  564|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +2

Query: 509 WVVIRKILLWVVLSGLIACLAAIIGMIITIPKECNIDLP-WYQGKVFYEVFPASFKDSNN 685
           W  +R IL  +     +   A  I +++  PK      P W+Q KV Y++  A+F DS+N
Sbjct: 58  WKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQTKVSYQLLTATFYDSDN 117

Query: 686 DGTGDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNN 808
           DG GDF G+  K+D+++ +GV  +    + +  H  E +N+
Sbjct: 118 DGVGDFAGISQKIDFLRKIGVTTVYPTPVIKI-HKDEYFNS 157


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
 Frame = +2

Query: 449 KLNGNLKINNRKLPSFVNWN-WVVIRKILLWVVLSGLI-ACLAAIIGMIITIPKECNIDL 622
           K    + ++ ++L  F N   W  IR +L   VL  LI   L A+  +++     C +  
Sbjct: 72  KNTDQIGLSEQELEQFRNDPCWKFIRTVLF--VLFWLIWLALFAVAILLVCFSPTCVLRA 129

Query: 623 P--WYQGKVFYEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAI 757
              W+Q  V Y V+  SF+DS+ DG GD  GLI +LD ++  GV  +
Sbjct: 130 KPNWWQTAVAYHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQTV 176


>AL117204-39|CAB55145.4|  422|Caenorhabditis elegans Hypothetical
           protein Y116A8C.9 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 482 KLPSFVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI 598
           KL   V+W W V+  I LWVVLS  +A +  +  +++++
Sbjct: 169 KLDKQVDWTWAVV-FIPLWVVLS--LAAVGVLYALVLSV 204


>U49829-5|AAK68351.1|  564|Caenorhabditis elegans Hypothetical
           protein F27D9.7 protein.
          Length = 564

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 817 RSYIIVIFRIMISLKY--IIKSNSSNT*ILYIIKFSY 713
           RSYII++F I ISL    I    +  T IL+IIK SY
Sbjct: 229 RSYIIILFAISISLFICTIYCCPNEPTEILFIIKASY 265


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 605 ECNIDLPWYQGKVFYEVFPASFKDSNNDGTG 697
           EC++D+ W  G V  + +P +  D+ N+  G
Sbjct: 338 ECDMDISWRYGPVVCKAYPLNDVDTINESDG 368


>Z79755-9|CAC42297.1|  143|Caenorhabditis elegans Hypothetical
           protein F43G9.13 protein.
          Length = 143

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 494 FVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITI---PKECNIDLPW 628
           ++N  W +   I LW+ LS ++  L A I  + T+   P  C I +P+
Sbjct: 38  YMNDWWEITLSIFLWMSLSFMVISLGATILSLFTLRKHPYVCFIPIPF 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,406,678
Number of Sequences: 27780
Number of extensions: 336809
Number of successful extensions: 880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)