Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_P04
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 99 4e-22
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 98 2e-21
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 83 4e-17
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 71 2e-13
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 51 2e-07
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.092
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 30 0.49
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.49
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.6
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 27 2.6
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 27 3.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 4.6
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 4.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.6
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 26 6.0
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 26 6.0
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 26 8.0
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 26 8.0
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 99 bits (238), Expect = 4e-22
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 2/222 (0%)
Frame = +3
Query: 171 SVEEVLKYFGTDPDKGLSP-DQIKRNQEKYGPNELPTEEGKSIWQLVLEQF-DDLLVKXX 344
SVE+ TD GLS +I R + +G N+L E+ +++ L+QF D L+
Sbjct: 9 SVEQTCADLETDMYNGLSSLQEITRRNKVHGDNDLKVEDEENMVVQFLKQFVKDPLILLL 68
Query: 345 XXXXXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPE 524
S L + DA S I L ++ VG QE +E +++AL P
Sbjct: 69 FASSAISVTLGNID---DAIS-------IALAIVIVVTVGFVQEYRSEQSLKALNNLVPH 118
Query: 525 MGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 704
VIR K+ + I A ++VPGD+V + +GD++PAD+R+++ +T + ID+S LTGE+
Sbjct: 119 YCNVIRSGKT--EHIVASKLVPGDLVILQIGDRVPADLRIVE--ATELEIDESNLTGENS 174
Query: 705 SVIKHTDPIPDPRAVNQDKKNILFSGTNVAXGKARGIVIGTG 830
K ++ I ++ ++ NI F GT V G RGIV+ TG
Sbjct: 175 PRKKSSEAISSNISLT-ERNNIAFMGTLVRHGHGRGIVVATG 215
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 97.9 bits (233), Expect = 2e-21
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Frame = +3
Query: 174 VEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXX 353
+++V F T GL+ ++ + +YG N L + G S W+++L Q + +
Sbjct: 15 IKDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILA 74
Query: 354 XXXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGK 533
SF + ++E VI I++ N VG QE AE +++L+ M
Sbjct: 75 AALSF----------GTTDWIEGGVISAIIVLNITVGFIQEYKAEKTMDSLRTLASPMAH 124
Query: 534 VIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 713
V R K+ I + +VPGDVV + GD +PAD+RL++ + D+++LTGES+ VI
Sbjct: 125 VTRSSKTDA--IDSHLLVPGDVVVLKTGDVVPADLRLVE--TVNFETDEALLTGESLPVI 180
Query: 714 K--HTDPIPDPRAVNQDKKNILFSGTNVAXGKARGIVIGTGL 833
K H + D+ N+ +S + V G+A+GI TG+
Sbjct: 181 KDAHATFQMNEDVPIGDRINLAYSSSIVTKGRAKGICYATGM 222
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 83.4 bits (197), Expect = 4e-17
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 3/221 (1%)
Frame = +3
Query: 177 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 356
EE+L+ TDP GL+ +++ ++KYG N++ E+ +I ++F V
Sbjct: 163 EELLE---TDPKYGLTESEVEERKKKYGLNQMKEEKTNNI-----KKFLSFFV------G 208
Query: 357 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 536
FV+ L +V+ VI +L+ NA VG QE A S ++ LK+ V
Sbjct: 209 PIQFVMELAAALAAGLRDWVDFGVICALLLLNATVGFVQEYQAGSIVDELKKTMALKASV 268
Query: 537 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 716
+R + V++I A EIVPGD++ + G PAD RLI +++DQS +TGES++V K
Sbjct: 269 LRDGR--VKEIEASEIVPGDILHLDEGTICPADGRLI-TKDCFLQVDQSAITGESLAVDK 325
Query: 717 H-TDPIPDPRAVNQDKKNILFSGT--NVAXGKARGIVIGTG 830
H D + V + + ++ + T + G+A +V G
Sbjct: 326 HQNDTMYSSSTVKRGEAFMVVTATADSTFVGRAASLVGAAG 366
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 71.3 bits (167), Expect = 2e-13
Identities = 54/181 (29%), Positives = 93/181 (51%)
Frame = +3
Query: 177 EEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVLEQFDDLLVKXXXXXX 356
EE+L+ TD + GL+ +++ ++KYG N++ E + ++
Sbjct: 75 EELLQ---TDMNTGLTMSEVEERRKKYGLNQMKEELENPFLKFIM-----------FFVG 120
Query: 357 XXSFVLALFEEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKV 536
FV+ + +V+ VI +L+ NAVVG QE A S ++ LK+ V
Sbjct: 121 PIQFVMEMAAALAAGLRDWVDFGVICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVV 180
Query: 537 IRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 716
IR + V ++ A E+VPGD++++ G I AD R++ +++DQS +TGES++V K
Sbjct: 181 IR--EGQVHELEANEVVPGDILKLDEGTIICADGRVV-TPDVHLQVDQSAITGESLAVDK 237
Query: 717 H 719
H
Sbjct: 238 H 238
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 50.8 bits (116), Expect = 2e-07
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 18/252 (7%)
Frame = +3
Query: 132 QHSNSTMEDAHTKSVEEVLKYFGTDPDKGLSPDQIKRNQEKYGPNELPTEEGKSIWQLVL 311
Q S+ +D++ K V + + D + + YG N LP + K + +L+L
Sbjct: 171 QMSDILNDDSNPKLVVHLDRIRSQDNNPEAKVSHDSDRVKYYGKNVLPEHDSKGLIRLML 230
Query: 312 EQFDDLLVKXXXXXXXXSFVLALFEEHE-----DAFSAFVEPFV-------ILLILIANA 455
E F D ++ S L L++ D + EP V I+ ++
Sbjct: 231 EAFKDKVLILLSIAAVVSLALGLYQTFGQPPTLDPITGKPEPRVEWVEGVAIMAAIVIVV 290
Query: 456 VVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 635
VG + E + L + D V ++V GDV+ V GD +P D
Sbjct: 291 TVGGVNDWQKELQFKKLNAKVSNFDVQVLRD-GAVHSTSVFDLVVGDVLFVEAGDVVPVD 349
Query: 636 IRLIKIYSTTIRIDQSILTGESVSVIKHTDPIPDPRAVNQD---KKN---ILFSGTNVAX 797
LI+ S + +D+S +TGE+ + IK D + D +KN L SGT +
Sbjct: 350 GVLIE--SNNLVLDESAMTGETDN-IKKVDANTAIERTSPDVEYRKNADPYLISGTTILE 406
Query: 798 GKARGIVIGTGL 833
G + +V G+
Sbjct: 407 GNGKLLVTAVGV 418
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 32.3 bits (70), Expect = 0.092
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -3
Query: 547 SPLMTLPISGSYSFKASMADSAFLSCHTPTTALAIRISKITK-GSTKAENASSCSSNKAN 371
S + + P+S + S A+ A S LS TTA + + ++ ST A +ASS N
Sbjct: 418 SSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVN 477
Query: 370 TNEIIAANSKILTKRSS 320
+ +A+S LT +S
Sbjct: 478 STTATSASSTPLTSVNS 494
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 29.9 bits (64), Expect = 0.49
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Frame = +3
Query: 567 IRAKEIVPGDVVEVSVGDK--IPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDPIPDP 740
I + ++V GDV E+S + PAD L+ S +++S+LTGES+ V K
Sbjct: 400 ISSTDLVIGDVFEISDPELTIFPADALLL---SGDCIVNESMLTGESIPVSKIPATDQSM 456
Query: 741 RAVNQDKKNI--------LFSGTNV 791
+ + KNI LFSGT +
Sbjct: 457 KELFSFSKNIPASLCKHFLFSGTKI 481
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 29.9 bits (64), Expect = 0.49
Identities = 26/96 (27%), Positives = 50/96 (52%)
Frame = +3
Query: 429 ILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEV 608
I+ I + + V + + +E+ I ++ P+ VIR Q + A ++V GD++
Sbjct: 226 IVFISSYSIFLSVKESKESENRIHSIIG-APQPVTVIRNQVK--QTVLADDLVIGDLLYF 282
Query: 609 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 716
S D + I ++S++ +D+S++TGESV K
Sbjct: 283 SNLDLKTCPVDGI-LFSSSCLLDESMVTGESVPARK 317
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 179 FHGFRVSVLHGGITMLPSVRFTYSLVPVT 93
F F ++ L GG+T LP + F Y L T
Sbjct: 2 FFAFLITYLLGGVTFLPFILFIYLLTRPT 30
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 495 IEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPAD 635
I++LK + E+ + +G + G+ EIV GD ++ V + P D
Sbjct: 639 IDSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPD 685
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 270 LPTEEGKSIWQLVLEQFDD 326
+PT +GK+I+++ LE FDD
Sbjct: 110 VPTIDGKNIFEIDLESFDD 128
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 576 KEIVPGDVVEVSVGDKIPADIRLI 647
K++ GD V+V D+IPADI +I
Sbjct: 295 KDVRVGDFVKVMDNDEIPADIVII 318
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +3
Query: 561 QKIRAKEIVPGDVVEVSVGDKIPADIRLI 647
+++ K ++ GD+V+V + IPAD+ ++
Sbjct: 320 ERVCRKSLLVGDIVKVLADEAIPADLLIL 348
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 90 TSYRDQAISETN*RQHSNSTMEDAHTKSVEEVLKYFGTDPDKG 218
T+ QA+ + R ++ T + +S ++L+YF T+PD G
Sbjct: 456 TTPEQQAVWDVFQRIYTRFTGSEGSKESFIKLLEYFVTEPDNG 498
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 793 ATLVPEKRMFFLSWFTARGSGMGSVCLMTETD 698
A + PEKR+ F S G + +V L T+TD
Sbjct: 306 AKVTPEKRLLFHSALKLSGPVLDAVLLDTDTD 337
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 26.2 bits (55), Expect = 6.0
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +3
Query: 384 EEHEDAFSAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQ 563
E+ +DA++ F+ ++ + + VG+ R ++ E +K P+ +V++ +
Sbjct: 106 EQKKDAYTKFMADLIVQAMELLGEPVGIVYSRQRDA--EIVKAAIPKATEVLKSKNGSID 163
Query: 564 -KIRAK------EIVPGDVVEVSVGDKIPAD 635
++ A+ + V G VV V +G KI D
Sbjct: 164 YELDAETDDFLNDSVLGGVVLVGLGGKIRVD 194
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.8 bits (54), Expect = 8.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 573 AKEIVPGDVVEVSVGDKIPADIRLIKI---YSTTIRIDQSILTGES 701
A+ I GDVV ++ +IPAD+ L++ IR DQ L GE+
Sbjct: 184 AQNIQAGDVVYIAKDQRIPADMILLETTVGNEAFIRTDQ--LDGET 227
>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
complex subunit Spp27|Schizosaccharomyces pombe|chr
3|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 207 PDKGLSPDQIKRNQEKYGPNELPTEEGKSI 296
PD L Q K N+E PN+LP +E K +
Sbjct: 195 PDDQLPKPQPK-NEEPAAPNDLPKQEEKEL 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,291,999
Number of Sequences: 5004
Number of extensions: 67032
Number of successful extensions: 234
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -