Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_P01
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0261 + 23663639-23664805                                         33   0.19 
10_08_0403 - 17635530-17635578,17635737-17635820,17636110-176362...    31   1.3  
12_02_1066 + 25785749-25785868,25785953-25786141,25786250-257864...    28   7.1  

>05_05_0261 + 23663639-23664805
          Length = 388

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
 Frame = +2

Query: 398 DSAGFIWNNIQDEGLKQALIDSYFSDTGLEYNMIRTPIGGSDFSSRAYTLNDYPLDDKEL 577
           D A + WN ++  G +   +    S +   Y+    P  GS+FS   Y L+D  L D+EL
Sbjct: 286 DEAPYAWNELESLGGRMLFVARGCSRS---YDANNNP--GSEFSEGVYFLDDGRLYDEEL 340

Query: 578 GNFSLTYEDYNYK-----LPMIKACIAAASSQVFMVGTTWSPPAWM 700
                 + +Y  +     LP  +A             +++SPPAW+
Sbjct: 341 MLGEPDFREYPCRDTGKWLPAAEANPRVVEFLPEQAPSSYSPPAWL 386


>10_08_0403 -
           17635530-17635578,17635737-17635820,17636110-17636219,
           17637507-17637638,17638497-17638576,17638877-17639008,
           17639534-17639648,17640244-17640286,17640359-17640493,
           17641347-17641414,17641473-17641478
          Length = 317

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/73 (24%), Positives = 30/73 (41%)
 Frame = +2

Query: 305 VFRKLSDCSTTIELDPTTKYQTIHGFGGAVTDSAGFIWNNIQDEGLKQALIDSYFSDTGL 484
           ++R L+D        P + YQ         +     +WN   DE L + +  +Y S  G 
Sbjct: 217 IYRSLADADAAAAPSPFSSYQPSETRSRTSSTELAHVWNKGVDETLGRLV--AYLSSRGC 274

Query: 485 EYNMIRTPIGGSD 523
           EY+  +  + G D
Sbjct: 275 EYSCWQFVLTGYD 287


>12_02_1066 +
           25785749-25785868,25785953-25786141,25786250-25786414,
           25786649-25786999,25787924-25788001,25788137-25788277,
           25788415-25788459,25788597-25788763,25788833-25788911,
           25788985-25789067,25789219-25789348,25789432-25789564,
           25789955-25790103,25790339-25790534,25791086-25791288
          Length = 742

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 345 WIPRRNTRLYMVSEVLSPILRASF-GTT 425
           W P  NT + +++E LSPI + SF GT+
Sbjct: 500 WDPDNNTLVGVIAEALSPITKLSFIGTS 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,126,503
Number of Sequences: 37544
Number of extensions: 418943
Number of successful extensions: 992
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)