Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O18
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 555 ISSNG*FSLKYCTLAI*FSINFWPPNP 475
           IS N   S+KY    +  S+  WPP P
Sbjct: 320 ISYNVLQSMKYLDQVVCESLRLWPPAP 346


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -1

Query: 373 VLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLLWFLNHHVSFKKGIFY 224
           +L  F   F  I    ++ CV++ S    W + LL+     + +   +FY
Sbjct: 600 LLLMFGVSFLLITQTIFIICVIVQSEQIAWLH-LLYIFLVGIMYAADVFY 648



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/40 (22%), Positives = 17/40 (42%)
 Frame = -1

Query: 403 RLYCNSYLHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHW 284
           RL+   + H +L  F   F  +    +  CV++    + W
Sbjct: 866 RLFNEIFGHGLLLMFGISFLLVTQTIFALCVVLQLQENDW 905


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = +2

Query: 269 EQWITPMADAGVNQYTFHIEPVKDVIEVCRKV 364
           + W    ++ G+N++ F ++ ++D+    RK+
Sbjct: 52  DPWFAGSSNVGINKWRFLLQCLEDLDRSLRKL 83


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 699  ASCTVLXSNFIVAAWSADPIMA 634
            A+CT L +  I  +W + P+ A
Sbjct: 1107 ATCTTLTAQTIRVSWVSPPLTA 1128


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 307 SIHISYRTCQRCNRSVQKS*RARNEGRSCNK 399
           S+H S R  ++ N    K    RN   SC K
Sbjct: 172 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 202


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 382 LHSVLSNFSAHFYYIFDRFYM 320
           L S L+NF    + +F+ FY+
Sbjct: 290 LTSFLNNFYFIIFQVFESFYL 310


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 307 SIHISYRTCQRCNRSVQKS*RARNEGRSCNK 399
           S+H S R  ++ N    K    RN   SC K
Sbjct: 120 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 150


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 307 SIHISYRTCQRCNRSVQKS*RARNEGRSCNK 399
           S+H S R  ++ N    K    RN   SC K
Sbjct: 303 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,657
Number of Sequences: 336
Number of extensions: 3457
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)