Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O18
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p pro...   256   2e-68
AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA...   256   2e-68
AY118788-1|AAM50648.1|  189|Drosophila melanogaster GH15296p pro...    29   4.7  
AF014951-1|AAB67804.1|  185|Drosophila melanogaster calcium-bind...    29   4.7  
AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.     29   8.1  

>AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p
           protein.
          Length = 221

 Score =  256 bits (628), Expect = 2e-68
 Identities = 116/162 (71%), Positives = 138/162 (85%)
 Frame = +2

Query: 206 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 385
           K LR KIK AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKV
Sbjct: 55  KSLRNKIKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKV 114

Query: 386 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVD 565
           G+AIKPGT V ++EKY+SI+D+VL+MTVEPGFGGQ FM + M KV++LRENYP LDIEVD
Sbjct: 115 GLAIKPGTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIEVD 174

Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTV 691
           GGVGP TI+CCA AGANMIVSGTA++G++DQ+  IK L   V
Sbjct: 175 GGVGPKTIHCCAEAGANMIVSGTAVVGASDQSQVIKELRDVV 216



 Score = 92.3 bits (219), Expect = 6e-19
 Identities = 46/60 (76%), Positives = 49/60 (81%)
 Frame = +1

Query: 49  LKALIGPSILNADLSQLYEXSQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 228
           ++A IGPSILNADLS L   SQKLLDNGADYLHLDVMDG FVPNLTFGHP   V S +NK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPM--VKSLRNK 60


>AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA
           protein.
          Length = 221

 Score =  256 bits (628), Expect = 2e-68
 Identities = 116/162 (71%), Positives = 138/162 (85%)
 Frame = +2

Query: 206 KCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKV 385
           K LR KIK AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V+E GMKV
Sbjct: 55  KSLRNKIKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKV 114

Query: 386 GVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVD 565
           G+AIKPGT V ++EKY+SI+D+VL+MTVEPGFGGQ FM + M KV++LRENYP LDIEVD
Sbjct: 115 GLAIKPGTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRENYPNLDIEVD 174

Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTV 691
           GGVGP TI+CCA AGANMIVSGTA++G++DQ+  IK L   V
Sbjct: 175 GGVGPKTIHCCAEAGANMIVSGTAVVGASDQSQVIKELRDVV 216



 Score = 92.3 bits (219), Expect = 6e-19
 Identities = 46/60 (76%), Positives = 49/60 (81%)
 Frame = +1

Query: 49  LKALIGPSILNADLSQLYEXSQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSEVPSRKNK 228
           ++A IGPSILNADLS L   SQKLLDNGADYLHLDVMDG FVPNLTFGHP   V S +NK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPM--VKSLRNK 60


>AY118788-1|AAM50648.1|  189|Drosophila melanogaster GH15296p
           protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 413 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 577
           +++ +K   IS+      V+    G+K+ E   A   ++  N+ LLDI+ DG VG
Sbjct: 68  IADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDIDSDGIVG 122


>AF014951-1|AAB67804.1|  185|Drosophila melanogaster calcium-binding
           protein protein.
          Length = 185

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 413 VSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVG 577
           +++ +K   IS+      V+    G+K+ E   A   ++  N+ LLDI+ DG VG
Sbjct: 64  IADDDKDGKISNQEFKDAVKKTCVGKKYEEFPQAMRAFIESNFKLLDIDSDGIVG 118


>AF189221-1|AAF61856.1|  743|Drosophila melanogaster HERC2 protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +2

Query: 293 DAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 418
           +AG N+  F ++P    +      R  G+ +G+A++ G+P+S
Sbjct: 430 EAGANRDCFLLDPTLSSVLQMNMFRFLGVLMGIAVRTGSPLS 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,446,431
Number of Sequences: 53049
Number of extensions: 595557
Number of successful extensions: 1301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)