Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_O18
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical pr... 176 1e-44
AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine r... 31 0.80
AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical ... 30 1.9
U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 28 5.7
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 28 5.7
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 7.5
>U28991-4|AAK68310.1| 227|Caenorhabditis elegans Hypothetical
protein F08F8.7 protein.
Length = 227
Score = 176 bits (428), Expect = 1e-44
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Frame = +2
Query: 230 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD---VIEVCRKVREHGMKVGVAIK 400
+ FF+ H+MV P QW+ PMA AG +Q+TFH E V V E+ K+R+ GMKVG+++K
Sbjct: 64 EPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGLSVK 123
Query: 401 PGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVDGGVGP 580
PGT V + K+ + D LIMTVEPGFGGQKFMEN M KV+ +R YP L I+VDGGV P
Sbjct: 124 PGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSKYPNLTIQVDGGVTP 183
Query: 581 STINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQDAIN 706
I A AGAN IVSGT II +ADQ+ + + + V+ AI+
Sbjct: 184 ENIEISAQAGANAIVSGTGIIKAADQSVAMTTIRNAVEAAIS 225
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/53 (66%), Positives = 40/53 (75%)
Frame = +1
Query: 49 LKALIGPSILNADLSQLYEXSQKLLDNGADYLHLDVMDGQFVPNLTFGHPXSE 207
L+ + PSILNADL+ L +KLL GAD+LHLDVMDG FVPNLTFGHP E
Sbjct: 3 LRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVE 55
>AF068709-13|AAO26012.1| 321|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 56 protein.
Length = 321
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 483 PNPGSTVIIKTMSDIEIYFSTSE-TGVPGFIATPTFIPCSLTFLH 352
P+P + II +M +EI FS TG F P+FI S+ FLH
Sbjct: 5 PSPPAP-IITSMETVEIEFSAKVFTGFQLFYGVPSFIIMSVLFLH 48
>AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical
protein C02A12.8 protein.
Length = 658
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = -1
Query: 382 LHSVLSNFSAHFYYIFDRFYMKCVLIDSSISHWCYPLLWFLNHHVSFKKGIFYFSSKALH 203
+H L + F I +Y+ LI + W +LW N+ S + + +H
Sbjct: 56 IHDFLRFYYRRFRRILPLYYLTIFLIVVMVHQWLPYILWDNNYRYSIASLLLITNQLVIH 115
Query: 202 XQGD 191
Q D
Sbjct: 116 DQAD 119
>U80026-3|AAC25845.2| 354|Caenorhabditis elegans Hypothetical
protein EGAP9.3 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 500 ENQMAKVQYLRENYPLLDIEVDGGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKL 676
+N++ K +YL +P+ I DGG+G + G M ++ TAI S D KL
Sbjct: 51 KNEIDKQKYLL--FPMTAIVFDGGLGNQLFEVFSLLGLAMKLNRTAIFNSDDWILHSKL 107
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 654 SADPIMAVPETIMLAPALAQQFIVDGPTPPSTSISSNG*FSLKYCTLAI*FS 499
++ I ++PETI P+L ++ D P +S S N LK L FS
Sbjct: 488 TSSAITSIPETITKLPSLTHLYLSDNPLDQLSSTSLNHLDGLKKIRLGGNFS 539
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 1433
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 2146
>Z49938-1|CAD59171.1| 1216|Caenorhabditis elegans Hypothetical protein
C09D8.1c protein.
Length = 1216
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 1140 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 1182
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical protein
C09D8.1b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 1391 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 1433
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 2104 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 2146
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 1411 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 1453
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 566 GGVGPSTINCCANAGANMIVSGTAIIGSADQAATIKLLXSTVQ 694
G GP T++CC+ AG + +II +A + + +TV+
Sbjct: 2124 GCTGPITVHCCSGAGRTAVFIALSIILDRMRAEHVVDVFTTVK 2166
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +2
Query: 296 AGVNQYTFHIEPVKDVIEVCRKVRE 370
+ +NQ+T + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +2
Query: 296 AGVNQYTFHIEPVKDVIEVCRKVRE 370
+ +NQ+T + P+KD+++V R V++
Sbjct: 249 SALNQFTITMVPIKDMVDVLRVVKD 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,096
Number of Sequences: 27780
Number of extensions: 317738
Number of successful extensions: 764
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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