Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_O15
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670...   135   4e-32
03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672     29   3.6  
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264...    29   3.6  
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149...    29   4.7  
01_01_0001 + 2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7...    28   8.3  

>07_03_0151 -
           14465479-14465675,14466280-14466401,14466934-14467081,
           14467146-14467167,14467299-14467393,14467395-14467438,
           14467750-14467841,14467911-14467982,14468188-14468229,
           14468333-14468494,14468631-14468683,14468808-14468925,
           14468974-14469150,14469573-14469639,14470195-14470273,
           14473805-14473862,14474257-14474346,14474429-14474540,
           14474649-14474912,14475361-14475463,14476200-14476278,
           14476748-14476852
          Length = 766

 Score =  135 bits (327), Expect = 4e-32
 Identities = 80/195 (41%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
 Frame = +3

Query: 147 DKCGXLLNKIKXALTQLTFLP-SNNVAANQ-KELILARDVLEIGAQWAVAVKDVKAFERY 320
           D C  LL+++K  LT+   LP S     N  +EL +ARD+ E     +V ++D  AFER 
Sbjct: 25  DTCVDLLSQLKVRLTKFPSLPPSFQQTPNAVEELKIARDIYEHAVVLSVKIEDQDAFERD 84

Query: 321 MSQLKCYYFDYKDHLPESAFTNQXXXXXXXXXXSQNRVAEFHTELERLPVDVIRTDLYIR 500
             QLK YY D    +P S                QNR+AEFHTELE LPV  +     I+
Sbjct: 85  FCQLKPYYMDTCGIIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLPVTALENPC-IK 143

Query: 501 HPLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEA 680
           H + LEQ  MEG+YN++  A+  VP E+Y +FMD L +TVR E+A C EK Y  +  AEA
Sbjct: 144 HAVELEQSFMEGAYNRVLSARQAVPHETYVYFMDLLAKTVRDELAGCSEKGYDYMSIAEA 203

Query: 681 ARRLNLSSQQAVLEY 725
            + L  SS + + +Y
Sbjct: 204 RQVLMFSSDKELHQY 218


>03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672
          Length = 242

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 615 TVRGEIAACIEKAYHTIPCAEAARRLNLSSQQAVL 719
           TV  E+AA +++A    P AEA RRL+LS   AVL
Sbjct: 94  TVLVEVAAVMDEAEEA-PGAEARRRLDLSGAAAVL 127


>02_05_0101 -
           25824093-25824112,25824734-25824842,25824927-25826429,
           25826596-25827333,25827712-25827919,25828455-25830409,
           25830868-25830960,25831044-25831100,25831189-25831272,
           25831345-25831437,25831622-25832053,25833593-25833933,
           25834663-25835215
          Length = 2061

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 615 TVRGEIAACIEKAYHTIPCAEAARRLNLSSQQAVL 719
           TV  E+AA +++A    P AEA RRL+LS   AVL
Sbjct: 53  TVLVEVAAVMDEAEEA-PGAEARRRLDLSGAAAVL 86


>06_01_0193 -
           1491710-1491739,1492194-1492319,1492631-1492766,
           1493048-1493112,1493213-1493305,1493433-1493498,
           1493763-1493843,1493977-1494032,1494692-1494780,
           1495340-1495425,1495531-1495647,1496109-1496254,
           1496665-1496725,1496831-1496914,1497028-1497135,
           1497286-1497388,1497802-1497845,1498100-1498584,
           1499417-1499603,1500150-1500362,1501066-1501323
          Length = 877

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 615 TVRGEIAACIEKAYHTIPCAEAARRLNLSSQQAVL 719
           TV  E+AA +++A    P AEA RRL+LS   AVL
Sbjct: 262 TVLVEVAAVMDQAEEA-PGAEARRRLDLSGVAAVL 295


>01_01_0001 +
           2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,
           7232-7320,7408-7608,8210-8311,9104-9187,9232-9244,
           9504-9562
          Length = 616

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 420 SQNRVAEFHTELERLPVDVIRTDLYI 497
           S++RV+E+   L R+ VDV+RTD ++
Sbjct: 379 SKDRVSEWLWTLHRIVVDVVRTDSHL 404


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,425,132
Number of Sequences: 37544
Number of extensions: 387200
Number of successful extensions: 882
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)